function h5ex_t_bit %************************************************************************** % % This example shows how to read and write bitfield % datatypes to a dataset. The program first writes bit % fields to a dataset with a dataspace of DIM0xDIM1, then % closes the file. Next, it reopens the file, reads back % the data, and outputs it to the screen. % % This file is intended for use with HDF5 Library version 1.8 %************************************************************************** fileName = 'h5ex_t_bit.h5'; DATASET = 'DS1'; DIM0 = 4; DIM1 = 7; dims = [DIM0 DIM1]; wdata = uint8(zeros(dims)); % % Initialize data. We will manually pack 4 2-bit integers into % each unsigned char data element. % for i=1: DIM0 for j=1: DIM1 ii=i-1; jj=j-1; wdata(i,j) = 0; % Field 'A' % wdata(i,j) = bitor(wdata(i,j), bitand(uint8((ii * jj - jj)), 3)); % Field 'B' % wdata(i,j) = bitor(wdata(i,j), bitshift(bitand(ii, 3), 2)); % Field 'C' % wdata(i,j) = bitor(wdata(i,j), bitshift(bitand(jj, 3), 4)); % Field 'D' % wdata(i,j) = bitor(wdata(i,j), bitshift(bitand((ii + jj), 3),6)); end end % %% Create a new file using the default properties. % file = H5F.create (fileName, 'H5F_ACC_TRUNC', 'H5P_DEFAULT', 'H5P_DEFAULT'); % % Create dataspace. Setting maximum size to [] sets the maximum % size to be the current size. % space = H5S.create_simple (2,fliplr( dims), []); % % Create the dataset and write the bitfield data to it. % dset = H5D.create (file, DATASET,'H5T_STD_B8BE',space,'H5P_DEFAULT'); H5D.write (dset, 'H5T_NATIVE_B8','H5S_ALL', 'H5S_ALL', 'H5P_DEFAULT',wdata); % % Close and release resources. % H5D.close (dset); H5S.close (space); H5F.close (file); % %% Now we begin the read section of this example. Here we assume % the dataset has the same name and rank, but can have any size. % % Open file and dataset. % file = H5F.open (fileName, 'H5F_ACC_RDONLY', 'H5P_DEFAULT'); dset = H5D.open (file, DATASET); % % Get dataspace and allocate memory for read buffer. This is a % two dimensional dataset so the dynamic allocation must be done % in steps. % space = H5D.get_space (dset); [~, dims, ~] = H5S.get_simple_extent_dims(space); dims=fliplr(dims); % % Read the data. % rdata =H5D.read (dset,'H5T_NATIVE_B8', 'H5S_ALL', 'H5S_ALL', 'H5P_DEFAULT'); % Reduce to a 2D matrix rdata=squeeze(rdata); % % Output the data to the screen. % fprintf ('%s:\n', DATASET); for i=1: dims(1) fprintf (' ['); for j=1: dims(2) A = bitand(rdata(i,j),03); % Retrieve field 'A' % B = bitand(bitshift(rdata(i,j),-2),03); % Retrieve field 'B' % C = bitand(bitshift(rdata(i,j),-4),03); % Retrieve field 'C' % D = bitand(bitshift(rdata(i,j),-6),03); % Retrieve field 'D' % fprintf (' {%d, %d, %d, %d} ', A, B, C, D); end fprintf (' ]\n'); end % % Close and release resources. % H5D.close (dset); H5S.close (space); H5F.close (file);