bioh5g_api.h

/*****************************************************************************
 * Copyright by The HDF Group                                                *
 * All rights reserved.                                                      *
 *                                                                           *
 * This file is part of BioHDF.  The full BioHDF copyright notice, including *
 * terms governing use, modification, and redistribution, is contained in    *
 * the file COPYING.  COPYING can be found at the root of the source code    *
 * distribution tree.  If you do not have access to this file, you may       *
 * request a copy from help@hdfgroup.org.                                    *
 *****************************************************************************/

#ifndef _BIOH5G_API_H
#define _BIOH5G_API_H

#include "biohdf_api.h"



/*****************************************************************************
 * BioH5G collection types                                                   *
 *****************************************************************************/



#define BIOH5G_READS_TYPE        "BIOH5G_READS"



#define BIOH5G_ALIGNMENTS_TYPE   "BIOH5G_ALIGNMENTS"



/*****************************************************************************
 * BioH5G Common Structs                                                     *
 *****************************************************************************/



typedef struct
{
    char reference[BIOHDF_MAX_STRING_SIZE];  
    int32_t start;                      
    int32_t end;                        
} bioh5g_reference_region;



#endif