Please see The HDF Group's new Support Portal for the latest information.
Increasing the Scale of Deep Sequencing Data Analysis with BioHDF
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Video from a talk by Todd Smith of Geospiza in which Todd
discusses how BioHDF systems can be used with next generation
DNA sequencing technologies. Delivered June 3, 2010 at the
"Sequencing, Finishing, Analysis in the Future" meeting at the
DOE Joint Genome Institute in Santa Fe, NM.
Standardizing the Next Generation of Bioinformatics Software Development with BioHDF
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A book chapter from Advances in Computational Biology (vol. 680) (requires subscription).
The chapter refers to the BioHDF prototype and not the new API and tools.
Slides (pdf) from the SC09 conference BioHDF birds-of-a-feather meeting.
A recent article about storing biological image data in HDF5.
Geospiza's CTO Todd Smith has several in-depth blog posts about using BioHDF.
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Scalable Bioinformatics Infrastructures with BioHDF (A five-part bloginar series)
Part 1
Part 2
Part 3
Part 4
Part 5
- - Last modified: 12 October 2016