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This web site is no longer maintained (but will remain online).
Please see The HDF Group's new Support Portal for the latest information.

BioHDF Publications

Increasing the Scale of Deep Sequencing Data Analysis with BioHDF

Standardizing the Next Generation of Bioinformatics Software Development with BioHDF

    A book chapter from Advances in Computational Biology (vol. 680) (requires subscription). The chapter refers to the BioHDF prototype and not the new API and tools.

Slides (pdf) from the SC09 conference BioHDF birds-of-a-feather meeting.

A recent article about storing biological image data in HDF5.


Geospiza's CTO Todd Smith has several in-depth blog posts about using BioHDF.


- - Last modified: 12 October 2016