H5IM: HDF5 Image

HDF5 Image API Reference

The HDF5 Image API defines a standard storage for HDF5 datasets that are intended to be interpreted as images. The specification for this API is presented in another document: HDF5 Image and Palette Specification. This version of the API is primarily concerned with two dimensional raster data similar to HDF4 Raster Images. The HDF5 image API uses the Lite HDF5 API.

The following functions are part of the HDF5 Image API version 1.0. 

Programming Hints:

To use any of these functions or subroutines, you must first include the relevant include file (C) or module (Fortran) in your application.

The following line includes the HDF5 Image package, H5IM, in C applications:
         #include "hdf5_hl.h"

This line includes the H5IM module in Fortran applications:
         use h5im

The C Interfaces:

The FORTRAN90 Interfaces:
In general, each FORTRAN90 subroutine performs exactly the same task as the corresponding C function. 

Name: H5IMmake_image_8bit

Signature:

herr_t H5IMmake_image_8bit ( hid_t loc_id, const char *dset_name,  hsize_t width, hsize_t height, const unsigned char *buffer) 

Purpose:

Creates and writes an image.

Description:

H5IMmake_image_8bit creates and writes a dataset named dset_name attached to the file or group specified by the identifier loc_id. Attributes conforming to the HDF5 Image and Palette specification for an indexed image are attached to the dataset, thus identifying it as an image. The image data is of the type H5T_NATIVE_UCHAR. An indexed image is an image in which each each pixel information storage is an index to a table palette.

Parameters:

hid_t loc_id	IN: Identifier of the file or group to create the dataset within.
const char *dset_name	IN: The name of the dataset to create.
hsize_t width	IN: The width of the image.
hsize_t height	IN: The height of the image.
const unsigned char *buffer	IN: Buffer with data to be written to the dataset.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5immake_image_8bit_f

subroutine h5immake_image_8bit_f(loc_id, dset_name, width, height, buf, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id           ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name      ! name of the dataset 
  integer(HSIZE_T), intent(IN) :: width          ! width of image  
  integer(HSIZE_T), intent(IN) :: height         ! height of image
  integer*1, intent(IN), dimension(*) :: buf     ! 1 byte integer data buffer 
  integer :: errcode                             ! error code
end subroutine h5immake_image_8bit_f
      

Name: H5IMmake_image_24bit

Signature:

herr_t H5IMmake_image_24bit ( hid_t loc_id, const char *dset_name,  hsize_t width, hsize_t height, const char *interlace, const unsigned char *buffer) 

Purpose:

Creates and writes a true color image.

Description:

H5Lmake_image_24bit creates and writes a dataset named dset_name attached to the file or group specified by the identifier loc_id. This function defines a true color image conforming to the HDF5 Image and Palette specification. The function assumes that the image data is of the type H5T_NATIVE_UCHAR.

A true color image is an image where the pixel storage contains several color planes. In a 24 bit RGB color model, these planes are red, green and blue. In a true color image the stream of bytes can be stored in several different ways, thus defining the interlace (or interleaving) mode. The 2 most used types of interlace mode are interlace by pixel and interlace by plane. In the 24 bit RGB color model example, interlace by plane means all the red components for the entire dataset are stored first, followed by all the green components, and then by all the blue components. Interlace by pixel in this example means that for each pixel the sequence red, green, blue is defined. In this function, the interlace mode is defined in the parameter interlace, a string that can have the values INTERLACE_PIXEL or INTERLACE_PLANE.

Parameters:

hid_t loc_id	IN: Identifier of the file or group to create the dataset within.
const char *dset_name	IN: The name of the dataset to create.
hsize_t width	IN: The width of the image.
hsize_t height	IN: The height of the image.
const char * interlace	IN: String defining the interlace mode.
const unsigned char * buffer	IN: Buffer with data to be written to the dataset.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5immake_image_24bit_f

subroutine h5immake_image_24bit_f(loc_id, dset_name, width, height, il, &
                                  buf, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id         ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name    ! name of the dataset 
  integer(HSIZE_T), intent(IN) :: width        ! width of image  
  integer(HSIZE_T), intent(IN) :: height       ! height of image
  character(LEN=*), intent(IN) :: il           ! interlace
  integer*1, intent(IN), dimension(*) :: buf   ! 1 byte integer data buffer 
  integer :: errcode                           ! error code
end subroutine h5immake_image_24bit_f
      

Name: H5IMget_image_info

Signature:

herr_t H5IMget_image_info( hid_t loc_id, const char *dset_name, hsize_t *width, hsize_t *height, hsize_t *planes, char *interlace, hssize_t *npals)

Purpose:

Gets information about an image dataset (dimensions, interlace mode and number of associated palettes).

Description:

H5IMget_image_info gets information about an image named dset_name attached to the file or group specified by the identifier loc_id. .

Parameters:

hid_t loc_id	IN: Identifier of the file or group in which the dataset is located.
const char *dset_name	IN: The name of the dataset.
hsize_t * width	OUT: The width of the image.
hsize_t * height	OUT: The height of the image.
hsize_t * planes	OUT: The number of color planes of the image.
char * interlace	OUT: The interlace mode of the image.
hssize_t * npals	OUT: The number of palettes associated to the image.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5imget_image_info_f

subroutine h5imget_image_info_f(loc_id, dset_name, width, height, planes, &
                                interlace, npals, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id            ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name       ! name of the dataset 
  integer(HSIZE_T), intent(INOUT) :: width        ! width of image  
  integer(HSIZE_T), intent(INOUT) :: height       ! height of image
  integer(HSIZE_T), intent(INOUT) :: planes       ! color planes
  integer(HSIZE_T), intent(INOUT) :: npals        ! palettes
  character(LEN=*), intent(INOUT) :: interlace    ! interlace 
  integer :: errcode                              ! error code
end subroutine h5imget_image_info_f
      

Name: H5IMread_image

Signature:

herr_t H5IMread_image ( hid_t loc_id, const char *dset_name, unsigned char *buffer )

Purpose:

Reads image data from disk.

Description:

H5IMread_image reads a dataset named dset_name attached to the file or group specified by the identifier loc_id.

Parameters:

hid_t loc_id	IN: Identifier of the file or group to read the dataset from.
const char *dset_name	IN: The name of the dataset.
unsigned char *buffer	OUT: Buffer with data to store the image.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5imread_image_f

subroutine h5imread_image_f(loc_id, dset_name, buf, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id             ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name        ! name of the dataset 
  integer*1, intent(INOUT), dimension(*) :: buf    ! 1 byte integer data buffer 
  integer :: errcode                               ! error code
end subroutine h5imread_image_f
      

Name: H5IMis_image

Signature:

herr_t H5IMis_image ( hid_t loc_id, const char *dset_name )

Purpose:

Inquires if a dataset is an image.

Description:

H5IMis_image inquires if a dataset  named dset_name, attached to the file or group specified by the identifier loc_id, is an image based on the HDF5 Image and Palette Specification.

Parameters:

hid_t loc_id	IN: Identifier of the file or group in which the dataset is located.
const char *dset_name	IN: The name of the dataset.

Returns:

Returns true, false, fail.

Fortran90 Interface: h5imis_image_f

integer function h5imis_image_f(loc_id, dset_name)
  implicit none
  integer(HID_T), intent(IN) :: loc_id         ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name    ! name of the dataset 
  integer :: errcode                           ! error code
end function h5imis_image_f
      

Name: H5IMmake_palette

Signature:

herr_t H5IMmake_palette( hid_t loc_id, const char *pal_name, const hsize_t *pal_dims, const unsigned char *pal_data )

Purpose:

Creates and writes a palette.

Description:

H5IMmake_palette creates and writes a dataset named pal_name. Attributes conforming to the HDF5 Image and Palette specification are attached to the dataset, thus identifying it as a palette. The palette data is of the type H5T_NATIVE_UCHAR.

Parameters:

hid_t loc_id	IN: Identifier of the file or group to create the dataset within.
const char *pal_name	IN: The name of the palette.
const hsize_t * pal_dims	IN: An array of the size of the palette dimensions.
const unsigned char *pal_data	IN: Buffer with data to be written to the dataset.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5immake_palette_f

subroutine h5immake_palette_f(loc_id, dset_name, pal_dims, buf, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id           ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name      ! name of the dataset 
  integer(HSIZE_T), intent(IN), dimension(*) :: pal_dims 
                                                 ! dimensions  
  integer*1, intent(IN), dimension(*) :: buf     ! 1 byte integer data buffer 
  integer :: errcode                             ! error code
end subroutine h5immake_palette_f
      

Name: H5IMlink_palette

Signature:

herr_t H5IMlink_palette( hid_t loc_id, const char *image_name, const char *pal_name)

Purpose:

Attaches a palette to an image.

Description:

H5IMlink_palette attaches a palette named pal_name to an image specified by image_name. The image dataset may or not already have an attached palette. If it has, the array of palette references is extended to hold the reference to the new palette.

Parameters:

hid_t loc_id	IN: Identifier of the file or group.
const char *image_name	IN: The name of the dataset to attach the palette to.
const char *pal_name	IN: The name of the palette.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5imlink_palette_f

subroutine h5imlink_palette_f(loc_id, dset_name, pal_name, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id          ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name     ! name of the dataset 
  character(LEN=*), intent(IN) :: pal_name      ! palette name 
  integer :: errcode                            ! error code 
end subroutine h5imlink_palette_f
      

Name: H5IMunlink_palette

Signature:

herr_t H5IMunlink_palette( hid_t loc_id, const char *image_name, const char *pal_name )

Purpose:

Dettaches a palette from an image.

Description:

H5IMunlink_palette dettaches a palette from an image specified by image_name.

Parameters:

hid_t loc_id	IN: Identifier of the file or group.
const char *image_name	IN: The name of the image dataset.
const char *pal_name	IN: The name of the palette.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5imunlink_palette_f

subroutine h5imunlink_palette_f(loc_id, dset_name, pal_name, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id          ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name     ! name of the dataset 
  character(LEN=*), intent(IN) :: pal_name      ! palette name 
  integer :: errcode                            ! error code
end subroutine h5imunlink_palette_f
      

Name: H5IMget_npalettes

Signature:

herr_t H5IMget_npalettes( hid_t loc_id, const char *image_name, hssize_t *npals )

Purpose:

Gets the number of palettes associated to an image.

Description:

H5IMget_npalettes gets the number of palettes associated to an image specified by image_name.

Parameters:

hid_t loc_id	IN: Identifier of the file or group in which the image dataset is located.
const char *image_name	IN: The name of the image dataset.
hssize_t *npals	OUT: The number of palettes.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5imget_npalettes_f

subroutine h5imget_npalettes_f(loc_id, dset_name, npals, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id          ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name     ! name of the dataset 
  integer(HSIZE_T), intent(INOUT) :: npals      ! palettes
  integer :: errcode                            ! error code
end subroutine h5imget_npalettes_f
      

Name: H5IMget_palette_info

Signature:

herr_t H5IMget_palette_info( hid_t loc_id, const char *image_name, int pal_number, hsize_t *pal_dims )

Purpose:

Gets information about a palette dataset (dimensions).

Description:

H5IMget_palette_info gets the dimensions of the palette dataset identified by pal_number (a zero based index) associated to an image specified by image_name.

Parameters:

hid_t loc_id	IN: Identifier of the file or group in which the image dataset is located.
const char *image_name	IN: The name of the image dataset.
int pal_number	IN: The zero based index that identifies the palette.
hsize_t *pal_dims	OUT: The dimensions of the palette dataset.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5imget_palette_info_f

subroutine h5imget_palette_info_f(loc_id, dset_name, pal_number, dims, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id            ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name       ! name of the dataset 
  integer, intent(IN) :: pal_number               ! palette number
  integer(HSIZE_T), dimension(*), intent(INOUT) :: dims 
                                                  ! dimensions 
  integer :: errcode                              ! error code
end subroutine h5imget_palette_info_f
      

Name: H5IMget_palette

Signature:

herr_t H5IMget_palette( hid_t loc_id, const char *image_name, int pal_number, unsigned char *pal_data )

Purpose:

Gets the palette dataset.

Description:

H5IMget_palette gets the palette dataset identified by pal_number (a zero based index) associated to an image specified by image_name.

Parameters:

hid_t loc_id	IN: Identifier of the file or group in which the image dataset is located.
const char *image_name	IN: The name of the image dataset.
int pal_number	IN: The zero based index that identifies the palette.
unsigned char *pal_data	OUT: The palette dataset.

Returns:

Returns a non-negative value if successful; otherwise returns a negative value.

Fortran90 Interface: h5imget_palette_f

subroutine h5imget_palette_f(loc_id, dset_name, pal_number, buf, errcode)
  implicit none
  integer(HID_T), intent(IN) :: loc_id            ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name       ! name of the dataset 
  integer, intent(IN) :: pal_number               ! palette number
  integer*1, intent(INOUT), dimension(*) :: buf   ! 1 byte integer data buffer 
  integer :: errcode                              ! error code
end subroutine h5imget_palette_f
      

Name: H5IMis_palette

Signature:

herr_t H5IMis_palette ( hid_t loc_id, const char *dset_name )

Purpose:

Inquires if a dataset is a palette.

Description:

H5IMis_palette inquires if a dataset named dset_name, attached to the file or group specified by the identifier loc_id, is a palette based on the HDF5 Image and Palette Specification.

Parameters:

hid_t loc_id	IN: Identifier of the file or group in which the dataset is located.
const char *dset_name	IN: The name of the dataset.

Returns:

Returns true, false, fail.

Fortran90 Interface: h5imis_palette_f

integer function h5imis_palette_f(loc_id, dset_name)
  implicit none
  integer(HID_T), intent(IN) :: loc_id         ! file or group identifier 
  character(LEN=*), intent(IN) :: dset_name    ! name of the dataset 
  integer :: errcode                           ! error code
end function h5imis_palette_f
      

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