Index

A B C D E F G H I L M N O P R S T U V W Z
All Classes|All Packages|Constant Field Values|Deprecated API|Serialized Form

A

addAttribute(HObject) - Method in class hdf.view.MetaDataView.DefaultBaseMetaDataView

addAttribute(HObject) - Method in interface hdf.view.MetaDataView.MetaDataView

Add an attribute to a data object.

addDataView(DataView) - Method in interface hdf.view.DataView.DataViewManager

Data content is displayed, add the dataview to the main windows

addDataView(DataView) - Method in class hdf.view.HDFView

addExtension(String) - Method in class hdf.view.DefaultFileFilter

Adds a filetype "dot" extension to filter against.

addFileExtension(String) - Static method in class hdf.object.FileFormat

Adds file extension(s) to the list of file extensions for supported file formats.

addFileFormat(String, FileFormat) - Static method in class hdf.object.FileFormat

Adds a FileFormat with specified key to the list of supported formats.

addFilteredImageValue(Number) - Method in class hdf.object.ScalarDS

Add a value that will be filtered out in an image.

addObject(HObject, Group) - Method in class hdf.view.TreeView.DefaultTreeView

Adds an already created HObject to the tree under the TreeItem containing the specified parent group.

addObject(HObject, Group) - Method in interface hdf.view.TreeView.TreeView

Adds an already created HObject to the tree under the TreeItem containing the specified parent group.

addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultBaseMetaDataView

addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultDatasetMetaDataView

addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultDatatypeMetaDataView

addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultGroupMetaDataView

addObjectSpecificContent() - Method in class hdf.view.MetaDataView.DefaultLinkMetaDataView

addToMemberList(HObject) - Method in class hdf.object.Group

Adds an object to the member list of this group in memory.

allocateArray(long, int) - Static method in class hdf.object.fits.FitsDatatype

Allocate an one-dimensional array of byte, short, int, long, float, double, or String to store data retrieved from an fits file based on the given fits datatype and dimension sizes.

allocateArray(long, int) - Static method in class hdf.object.h4.H4Datatype

Allocate a 1D array large enough to hold a multidimensional array of 'datasize' elements of 'datatype' numbers.

allocateArray(H5Datatype, int) - Static method in class hdf.object.h5.H5Datatype

Allocates a one-dimensional array of byte, short, int, long, float, double, or String to store data in memory.

allocateArray(DataType, int) - Static method in class hdf.object.nc2.NC2Datatype

Allocate an one-dimensional array of byte, short, int, long, float, double, or String to store data retrieved from an NetCDF3 file based on the given NetCDF3 datatype and dimension sizes.

AND - Enum constant in enum class hdf.view.ViewProperties.BITMASK_OP

applyBitmask(Object, BitSet, ViewProperties.BITMASK_OP) - Static method in class hdf.view.Tools

Apply bitmask to a data array.

arrayDims - Variable in class hdf.object.Datatype

The dimensions of the ARRAY element of an ARRAY datatype.

arrayLengthLabel - Variable in class hdf.view.dialog.NewDataObjectDialog

Attribute - Class in hdf.object

An attribute is a (name, value) pair of metadata attached to a primary data object such as a dataset, group or named datatype.

Attribute(HObject, String, Datatype, long[]) - Constructor for class hdf.object.Attribute

Create an attribute with specified name, data type and dimension sizes.

Attribute(HObject, String, Datatype, long[], Object) - Constructor for class hdf.object.Attribute

Create an attribute with specific name and value.

attributeInfoPane - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

attributeList - Variable in class hdf.object.h5.H5Group

The list of attributes of this data object.

autoContrastApply(Object, Object, double[], double[], boolean) - Static method in class hdf.view.Tools

Apply autocontrast parameters to the original data in place (destructive)

autoContrastCompute(Object, double[], boolean) - Static method in class hdf.view.Tools

Computes autocontrast parameters (gain equates to contrast and bias equates to brightness) for integers.

autoContrastComputeMinMax(Object, double[]) - Static method in class hdf.view.Tools

Computes autocontrast parameters by

autoContrastConvertImageBuffer(Object, byte[], boolean) - Static method in class hdf.view.Tools

Converts image raw data to bytes.

B

baseType - Variable in class hdf.object.Datatype

The base datatype of this datatype (null if this datatype is atomic).

bigDecimalToByte(int, int, BigDecimal[]) - Method in class hdf.object.h5.H5Datatype

Convert from an array of BigDecimal into an array of bytes

bigDecimalToByte(BigDecimal[], int) - Method in class hdf.object.h5.H5Datatype

Convert from a single BigDecimal object from an array of BigDecimal into an array of bytes

binaryOrder - Variable in class hdf.view.TableView.DefaultBaseTableView

bitmask - Variable in class hdf.view.TableView.DefaultBaseTableView

BITMASK - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

bitmaskOP - Variable in class hdf.view.TableView.DefaultBaseTableView

BITMASKOP - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

BORDER - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

breadthFirstMemberList() - Method in class hdf.object.Group

buildIndexMaps(CompoundDataFormat, List<Datatype>) - Static method in class hdf.view.TableView.DataFactoryUtils

byteToBigDecimal(byte[], int) - Method in class hdf.object.h5.H5Datatype

Convert 4 bytes from an array of bytes into a single BigDecimal

byteToBigDecimal(int, int, byte[]) - Method in class hdf.object.h5.H5Datatype

Convert a range from an array of bytes into an array of BigDecimal

byteToString(byte[], int) - Static method in class hdf.object.Dataset

Converts an array of bytes into an array of Strings for a fixed string dataset.

C

canonicalToDisplayValue(Object) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

cellColIdx - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

cellColIdx - Variable in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator

cellLabel - Variable in class hdf.view.TableView.DefaultBaseTableView

cellRowIdx - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

cellValueField - Variable in class hdf.view.TableView.DefaultBaseTableView

CHAR - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

Chart - Class in hdf.view

ChartView displays a histogram/line chart of selected row/column of table data or image data.

Chart(Shell, String, int, double[][], double[], double[]) - Constructor for class hdf.view.Chart

Constructs a new ChartView given data and data ranges.

chartP - Variable in class hdf.view.Chart

Panel that draws plot of data values.

checkBin - Variable in class hdf.view.TableView.DefaultBaseTableView

checkCustomNotation - Variable in class hdf.view.TableView.DefaultBaseTableView

checkEnum - Variable in class hdf.view.TableView.DefaultBaseTableView

checkFixedDataLength - Variable in class hdf.view.TableView.DefaultBaseTableView

Global variables for GUI components

checkHex - Variable in class hdf.view.TableView.DefaultBaseTableView

checkNewFile(String, String) - Static method in class hdf.view.Tools

Check and find a non-exist file.

checkScientificNotation - Variable in class hdf.view.TableView.DefaultBaseTableView

checkUnsigned - Variable in class hdf.view.dialog.NewDataObjectDialog

checkValidJavaArrayIndex(long) - Static method in class hdf.view.Tools

Since Java does not allow array indices to be larger than int type, check the given value to see if it is within the valid range of a Java int.

checkValidValue(Object) - Method in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator

chunkSize - Variable in class hdf.object.Dataset

The array of dimension sizes for a chunk.

CLASS_ARRAY - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_BITFIELD - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_CHAR - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_COMPOUND - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_ENUM - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_FLOAT - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_INTEGER - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_NO_CLASS - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_OPAQUE - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_REFERENCE - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_STRING - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_TIME - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

CLASS_VLEN - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

classChoice - Variable in class hdf.view.dialog.NewDataObjectDialog

clear() - Method in class hdf.object.Dataset

Clears memory held by the dataset, such as the data buffer.

clear() - Method in class hdf.object.Group

Clears up member list and other resources in memory for the group.

clear() - Method in class hdf.object.h5.H5CompoundDS

clear() - Method in class hdf.object.h5.H5Group

clear() - Method in class hdf.object.h5.H5ScalarDS

clearData() - Method in class hdf.object.Attribute

clearData() - Method in interface hdf.object.DataFormat

Clears the current data buffer in memory and forces the next read() to load the data from file.

clearData() - Method in class hdf.object.Dataset

Clears the current data buffer in memory and forces the next read() to load the data from file.

clearData() - Method in class hdf.object.ScalarDS

close() - Method in class hdf.object.FileFormat

Closes file associated with this instance.

close() - Method in class hdf.object.fits.FitsFile

close() - Method in class hdf.object.h4.H4File

close() - Method in class hdf.object.h5.H5File

Closes file associated with this H5File instance.

close() - Method in class hdf.object.nc2.NC2File

close(long) - Method in class hdf.object.Attribute

close(long) - Method in class hdf.object.Datatype

Closes a datatype identifier.

close(long) - Method in class hdf.object.fits.FitsDataset

close(long) - Method in class hdf.object.fits.FitsDatatype

close(long) - Method in class hdf.object.fits.FitsGroup

close group access

close(long) - Method in class hdf.object.h4.H4Attribute

close(long) - Method in class hdf.object.h4.H4Datatype

close(long) - Method in class hdf.object.h4.H4GRImage

close(long) - Method in class hdf.object.h4.H4Group

close group access.

close(long) - Method in class hdf.object.h4.H4SDS

close(long) - Method in class hdf.object.h4.H4Vdata

close(long) - Method in class hdf.object.h5.H5Attribute

close(long) - Method in class hdf.object.h5.H5CompoundDS

close(long) - Method in class hdf.object.h5.H5Datatype

Closes a datatype identifier.

close(long) - Method in class hdf.object.h5.H5Group

close(long) - Method in class hdf.object.h5.H5Link

close(long) - Method in class hdf.object.h5.H5ScalarDS

close(long) - Method in class hdf.object.HObject

Closes access to the object.

close(long) - Method in class hdf.object.nc2.NC2Attribute

close(long) - Method in class hdf.object.nc2.NC2Dataset

close(long) - Method in class hdf.object.nc2.NC2Datatype

close(long) - Method in class hdf.object.nc2.NC2Group

closeFile(FileFormat) - Method in class hdf.view.HDFView

closeFile(FileFormat) - Method in class hdf.view.TreeView.DefaultTreeView

Close a file

closeFile(FileFormat) - Method in interface hdf.view.TreeView.TreeView

close a file

CMPD_START_IDX_MAP_INDEX - Static variable in class hdf.view.TableView.DataFactoryUtils

COL_TO_BASE_CLASS_MAP_INDEX - Static variable in class hdf.view.TableView.DataFactoryUtils

colCount - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

ColumnHeader(IUniqueIndexLayer, ILayer, SelectionLayer) - Constructor for class hdf.view.TableView.DefaultBaseTableView.ColumnHeader

columnHeaderDataProvider - Variable in class hdf.view.TableView.DefaultBaseTableView

CompoundDataFormat - Interface in hdf.object

An interface that provides general operations for data with a Compound datatype.

CompoundDS - Class in hdf.object

A CompoundDS is a dataset with compound datatype.

CompoundDS(FileFormat, String, String) - Constructor for class hdf.object.CompoundDS

Constructs a CompoundDS object with the given file, dataset name and path.

CompoundDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.CompoundDS

Deprecated.

Not for public use in the future.
Using CompoundDS(FileFormat, String, String)

compoundMemberNames - Variable in class hdf.object.Datatype

The list of names of members of a compound Datatype.

compoundMemberOffsets - Variable in class hdf.object.Datatype

The list of offsets of members of a compound Datatype.

compoundMemberTypes - Variable in class hdf.object.Datatype

The list of types of members of a compound Datatype.

compression - Variable in class hdf.object.Dataset

The compression information.

COMPRESSION_GZIP_TXT - Static variable in class hdf.object.Dataset

computeStatistics(Object, double[], Object) - Static method in class hdf.view.Tools

Computes mean and standard deviation of a data array

configureUiBindings(UiBindingRegistry) - Method in class hdf.view.TableView.DefaultBaseTableView.RefContextMenu

contentTabFolder - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

convertAttribute(HObject, Attribute) - Static method in class hdf.object.nc2.NC2File

convertBigDecimalToByte(BigDecimal) - Method in class hdf.object.h5.H5Datatype

Convert a BigDecimal to a byte array .

CONVERTBYTE - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

convertByteToBigDecimal(byte[]) - Method in class hdf.object.h5.H5Datatype

Convert byte array data to a BigDecimal.

convertByteToString - Variable in class hdf.object.Dataset

Flag to indicate if the byte[] array is converted to strings

convertCompoundByteMember(byte[], long, long, long) - Method in class hdf.object.Attribute

Given an array of bytes representing a compound Datatype and a start index and length, converts len number of bytes into the correct Object type and returns it.

convertCompoundByteMember(byte[], long, long, long) - Method in class hdf.object.h5.H5Attribute

Given an array of bytes representing a compound Datatype and a start index and length, converts len number of bytes into the correct Object type and returns it.

convertedBuf - Variable in class hdf.object.Dataset

The array that holds the converted data of unsigned C-type integers.

convertEnumNameToValue(String[]) - Method in class hdf.object.h5.H5Datatype

Converts names in an Enumeration Datatype to values.

convertEnumValueToName(Object) - Method in class hdf.object.h5.H5Datatype

Converts values in an Enumeration Datatype to names.

convertFromUnsignedC() - Method in class hdf.object.Attribute

Converts the data values of this Attribute to appropriate Java integers if they are unsigned integers.

convertFromUnsignedC() - Method in interface hdf.object.DataFormat

Converts the data values of this data object to appropriate Java integers if they are unsigned integers.

convertFromUnsignedC() - Method in class hdf.object.h4.H4Vdata

convertFromUnsignedC() - Method in class hdf.object.h5.H5CompoundDS

convertFromUnsignedC() - Method in class hdf.object.ScalarDS

Converts the data values of this dataset to appropriate Java integer if they are unsigned integers.

convertFromUnsignedC(Object) - Static method in class hdf.object.Dataset

Deprecated.

Not for public use in the future.
Using Dataset.convertFromUnsignedC(Object, Object)

convertFromUnsignedC(Object, Object) - Static method in class hdf.object.Dataset

Converts one-dimension array of unsigned C-type integers to a new array of appropriate Java integer in memory.

convertImageToHDF(String, String, String, String) - Static method in class hdf.view.Tools

Converts an image file into HDF4/5 file.

convertToUnsignedC() - Method in class hdf.object.Attribute

Converts Java integer data values of this Attribute back to unsigned C-type integer data if they are unsigned integers.

convertToUnsignedC() - Method in interface hdf.object.DataFormat

Converts Java integer data values of this data object back to unsigned C-type integer data if they are unsigned integers.

convertToUnsignedC() - Method in class hdf.object.h4.H4Vdata

convertToUnsignedC() - Method in class hdf.object.h5.H5CompoundDS

convertToUnsignedC() - Method in class hdf.object.ScalarDS

Converts Java integer data of this dataset back to unsigned C-type integer data if they are unsigned integers.

convertToUnsignedC(Object) - Static method in class hdf.object.Dataset

Deprecated.

Not for public use in the future.
Using Dataset.convertToUnsignedC(Object, Object)

convertToUnsignedC(Object, Object) - Static method in class hdf.object.Dataset

Converts the array of converted unsigned integers back to unsigned C-type integer data in memory.

convertUINT64toBigInt(Long) - Static method in class hdf.view.Tools

Converts unsigned 64-bit integer data to a BigInteger since Java does not have unsigned types.

copy(Group, String, long[], Object) - Method in class hdf.object.Attribute

copy(Group, String, long[], Object) - Method in class hdf.object.CompoundDS

Deprecated.

Not implemented for compound dataset.

copy(Group, String, long[], Object) - Method in class hdf.object.Dataset

Creates a new dataset and writes the data buffer to the new dataset.

copy(Group, String, long[], Object) - Method in class hdf.object.fits.FitsDataset

copy(Group, String, long[], Object) - Method in class hdf.object.h4.H4GRImage

copy(Group, String, long[], Object) - Method in class hdf.object.h4.H4SDS

copy(Group, String, long[], Object) - Method in class hdf.object.h4.H4Vdata

copy(Group, String, long[], Object) - Method in class hdf.object.h5.H5ScalarDS

copy(Group, String, long[], Object) - Method in class hdf.object.nc2.NC2Dataset

copy(HObject, Group) - Method in class hdf.object.FileFormat

Deprecated.

As of 2.4, replaced by FileFormat.copy(HObject, Group, String)

To mimic the behavior originally provided by this method, call the replacement method with null as the 3rd parameter.

copy(HObject, Group, String) - Method in class hdf.object.FileFormat

Copies the source object to a new destination.

copy(HObject, Group, String) - Method in class hdf.object.fits.FitsFile

copy(HObject, Group, String) - Method in class hdf.object.h4.H4File

Copy an object to a group.

copy(HObject, Group, String) - Method in class hdf.object.h5.H5File

copy(HObject, Group, String) - Method in class hdf.object.nc2.NC2File

copyAttributes(int, int) - Method in class hdf.object.nc2.NC2File

copyAttributes(long, long) - Method in class hdf.object.fits.FitsFile

copyAttributes(long, long) - Static method in class hdf.object.h5.H5File

Copies the attributes of one object to another object.

copyAttributes(HObject, HObject) - Method in class hdf.object.fits.FitsFile

copyAttributes(HObject, HObject) - Static method in class hdf.object.h5.H5File

Copies the attributes of one object to another object.

copyAttributes(HObject, HObject) - Method in class hdf.object.nc2.NC2File

create() - Method in class hdf.view.dialog.UserOptionsDialog

create(String) - Method in class hdf.object.FileFormat

Deprecated.

As of 2.4, replaced by FileFormat.createFile(String, int)

The replacement method has an additional parameter that controls the behavior if the file already exists. Use FileFormat.FILE_CREATE_DELETE as the second argument in the replacement method to mimic the behavior originally provided by this method.

create(String, Group) - Static method in class hdf.object.fits.FitsGroup

Creates a new group.

create(String, Group) - Static method in class hdf.object.h4.H4Group

Creates a new group.

create(String, Group) - Static method in class hdf.object.nc2.NC2Group

Creates a new group.

create(String, Group, long...) - Static method in class hdf.object.h5.H5Group

Creates a new group with a name in a group and with the group creation properties specified in gplist.

create(String, Group, long[], long[], long[], int, String[], Datatype[], int[], long[][], Object) - Static method in class hdf.object.h5.H5CompoundDS

Creates a simple compound dataset in a file with/without chunking and compression.

create(String, Group, long[], String[], Datatype[], int[], long[][], Object) - Static method in class hdf.object.h5.H5CompoundDS

Deprecated.

Not for public use in the future.
Using H5CompoundDS.create(String, Group, long[], long[], long[], int, String[], Datatype[], int[], long[][], Object)

create(String, Group, long[], String[], Datatype[], int[], Object) - Static method in class hdf.object.h5.H5CompoundDS

Deprecated.

Not for public use in the future.
Using H5CompoundDS.create(String, Group, long[], long[], long[], int, String[], Datatype[], int[], long[][], Object)

create(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Static method in class hdf.object.h4.H4GRImage

Creates a new image.

create(String, Group, Datatype, long[], long[], long[], int, Object) - Static method in class hdf.object.fits.FitsDataset

Creates a new dataset.

create(String, Group, Datatype, long[], long[], long[], int, Object) - Static method in class hdf.object.h4.H4SDS

create(String, Group, Datatype, long[], long[], long[], int, Object) - Static method in class hdf.object.h5.H5ScalarDS

create(String, Group, Datatype, long[], long[], long[], int, Object) - Static method in class hdf.object.nc2.NC2Dataset

Creates a new dataset.

create(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Static method in class hdf.object.h4.H4SDS

Creates a new dataset.

create(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Static method in class hdf.object.h5.H5ScalarDS

Creates a scalar dataset in a file with/without chunking and compression.

CREATE - Static variable in class hdf.object.FileFormat

File access flag for creating/truncating with read-write permission.

createCompoundDS(String, Group, long[], long[], long[], int, String[], Datatype[], int[], Object) - Method in class hdf.object.FileFormat

Creates a new compound dataset in a file with/without chunking and compression.

createCompoundDS(String, Group, long[], long[], long[], int, String[], Datatype[], int[], Object) - Method in class hdf.object.h5.H5File

createCompoundDS(String, Group, long[], String[], Datatype[], int[], Object) - Method in class hdf.object.FileFormat

Deprecated.

As of 2.4, replaced by FileFormat.createCompoundDS(String, Group, long[], long[], long[], int, String[], Datatype[], int[], Object)

The replacement method has additional parameters: maxdims, chunks, and gzip. To mimic the behavior originally provided by this method, call the replacement method with the following parameter list: ( name, pgroup, dims, null, null, -1, memberNames, memberDatatypes, memberSizes, data );

createCompoundFieldType(String) - Method in class hdf.object.h5.H5Datatype

Creates a datatype of a compound with one field.

createContents(Composite) - Method in class hdf.view.dialog.UserOptionsGeneralPage

Creates and returns the SWT control for the customized body of this preference page under the given parent composite.

createContents(Composite) - Method in class hdf.view.dialog.UserOptionsHDFPage

Creates and returns the SWT control for the customized body of this preference page under the given parent composite.

createContents(Composite) - Method in class hdf.view.dialog.UserOptionsViewModulesPage

Creates and returns the SWT control for the customized body of this preference page under the given parent composite.

createControl(Composite) - Method in class hdf.view.dialog.UserOptionsDefaultPage

createDatatype(int, int, int, int) - Method in class hdf.object.FileFormat

Creates a new datatype in memory.

createDatatype(int, int, int, int) - Method in class hdf.object.fits.FitsFile

createDatatype(int, int, int, int) - Method in class hdf.object.h4.H4File

createDatatype(int, int, int, int) - Method in class hdf.object.h5.H5File

Methods related to Datatypes and HObjects in HDF5 Files.

createDatatype(int, int, int, int) - Method in class hdf.object.nc2.NC2File

createDatatype(int, int, int, int, Datatype) - Method in class hdf.object.FileFormat

Creates a new datatype in memory.

createDatatype(int, int, int, int, Datatype) - Method in class hdf.object.h4.H4File

createDatatype(int, int, int, int, Datatype) - Method in class hdf.object.h5.H5File

createDatatype(int, int, int, int, Datatype) - Method in class hdf.object.nc2.NC2File

createDatatypeWidget() - Method in class hdf.view.dialog.NewDataObjectDialog

createFile(String, int) - Method in class hdf.object.FileFormat

Creates a file with the specified name and returns a new FileFormat implementation instance associated with the file.

createFile(String, int) - Method in class hdf.object.h4.H4File

Creates an HDF4 file with the specified name and returns a new H4File instance associated with the file.

createFile(String, int) - Method in class hdf.object.h5.H5File

Creates an HDF5 file with the specified name and returns a new H5File instance associated with the file.

createFullname(String, String) - Method in class hdf.object.HObject

createGcpl(int, int, int) - Method in class hdf.object.FileFormat

Creates the group creation property list identifier, gcpl.

createGcpl(int, int, int) - Method in class hdf.object.h5.H5File

Creates the group creation property list identifier, gcpl.

createGrayPalette() - Static method in class hdf.view.Tools

Creates the gray palette of the indexed 256-color table.

createGrayWavePalette() - Static method in class hdf.view.Tools

Creates the gray wave palette of the indexed 256-color table.

createGroup(String, Group) - Method in class hdf.object.FileFormat

Creates a new group with specified name in existing group.

createGroup(String, Group) - Method in class hdf.object.fits.FitsFile

createGroup(String, Group) - Method in class hdf.object.h4.H4File

createGroup(String, Group) - Method in class hdf.object.h5.H5File

Creates a new group with specified name in existing group.

createGroup(String, Group) - Method in class hdf.object.nc2.NC2File

createGroup(String, Group, long...) - Method in class hdf.object.FileFormat

Creates a new group with specified name in existing group.

createGroup(String, Group, long...) - Method in class hdf.object.h5.H5File

Creates a new group with specified name in existing group and with the group creation properties list, gplist.

createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.FileFormat

Creates a new image in a file.

createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.fits.FitsFile

createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.h4.H4File

createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.h5.H5File

createImage(String, Group, Datatype, long[], long[], long[], int, int, int, Object) - Method in class hdf.object.nc2.NC2File

createIndexedImage(BufferedImage, byte[], byte[][], long, long) - Static method in class hdf.view.Tools

Creates a RGB indexed image of 256 colors.

createInstance(String, int) - Method in class hdf.object.FileFormat

Creates a FileFormat implementation instance with specified filename and access.

createInstance(String, int) - Method in class hdf.object.fits.FitsFile

Creates a FitsFile instance with specified file name and READ access.

createInstance(String, int) - Method in class hdf.object.h4.H4File

Creates an H4File instance with specified file name and access.

createInstance(String, int) - Method in class hdf.object.h5.H5File

Creates an H5File instance with specified file name and access.

createInstance(String, int) - Method in class hdf.object.nc2.NC2File

Creates a NC2File instance with specified file name and READ access.

createLink(Group, String, HObject, int) - Method in class hdf.object.FileFormat

Creates a soft, hard or external link to an existing object in the open file.

createLink(Group, String, HObject, int) - Method in class hdf.object.h5.H5File

Creates a link to an object in the open file.

createLink(Group, String, Object) - Method in class hdf.object.FileFormat

Creates a link to an existing object in the open file.

createLink(Group, String, Object) - Method in class hdf.object.h5.H5File

createLink(Group, String, String, int) - Method in class hdf.object.FileFormat

Creates a soft or external link to an object in a file that does not exist at the time the link is created.

createLink(Group, String, String, int) - Method in class hdf.object.h5.H5File

Creates a soft or external link to object in a file that does not exist at the time the link is created.

createMenuBar(Shell) - Method in class hdf.view.TableView.DefaultBaseTableView

createMenuBar(Shell) - Method in class hdf.view.TableView.DefaultScalarDSTableView

Creates the menubar for the Shell.

createNamedDatatype(Datatype, String) - Method in class hdf.object.FileFormat

Creates a named datatype in a file.

createNamedDatatype(Datatype, String) - Method in class hdf.object.fits.FitsFile

createNamedDatatype(Datatype, String) - Method in class hdf.object.h4.H4File

createNamedDatatype(Datatype, String) - Method in class hdf.object.h5.H5File

Creates a named datatype in a file.

createNamedDatatype(Datatype, String) - Method in class hdf.object.nc2.NC2File

createNative() - Method in class hdf.object.Datatype

Converts the datatype object to a native datatype.

createNative() - Method in class hdf.object.fits.FitsDatatype

createNative() - Method in class hdf.object.h4.H4Datatype

createNative() - Method in class hdf.object.h5.H5Datatype

createNative() - Method in class hdf.object.nc2.NC2Datatype

createNaturePalette() - Static method in class hdf.view.Tools

Creates the nature palette of the indexed 256-color table.

createNewDatatype() - Method in class hdf.view.dialog.NewDatatypeDialog

createNewDatatype(String) - Method in class hdf.view.dialog.NewDataObjectDialog

createNewFile(String, String, String, List<FileFormat>) - Static method in class hdf.view.Tools

Create a new HDF file with default file creation properties

createPropertyFile(String, String) - Static method in class hdf.view.ViewProperties

createRainbowPalette() - Static method in class hdf.view.Tools

Creates the rainbow palette of the indexed 256-color table.

createReverseGrayPalette() - Static method in class hdf.view.Tools

Creates the reverse gray palette of the indexed 256-color table.

createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object) - Method in class hdf.object.FileFormat

createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.FileFormat

Creates a new dataset in a file with/without chunking/compression.

createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.fits.FitsFile

createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.h4.H4File

createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.h5.H5File

createScalarDS(String, Group, Datatype, long[], long[], long[], int, Object, Object) - Method in class hdf.object.nc2.NC2File

createTable(Composite, DataFormat) - Method in class hdf.view.TableView.DefaultBaseTableView

createTable(Composite, DataFormat) - Method in class hdf.view.TableView.DefaultCompoundDSTableView

Creates a NatTable for a Compound dataset

createTable(Composite, DataFormat) - Method in class hdf.view.TableView.DefaultScalarDSTableView

Creates a NatTable for a Scalar dataset.

createTrueColorImage(byte[], boolean, long, long) - Static method in class hdf.view.Tools

Creates a true color image.

createUI() - Method in class hdf.view.PaletteView.DefaultPaletteView

createWavePalette() - Static method in class hdf.view.Tools

Creates the wave palette of the indexed 256-color table.

CRT_ORDER_INDEXED - Static variable in class hdf.object.Group

CRT_ORDER_TRACKED - Static variable in class hdf.object.Group

curFont - Variable in class hdf.view.dialog.NewDataObjectDialog

curFont - Variable in class hdf.view.dialog.UserOptionsDefaultPage

curFont - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

curFont - Variable in class hdf.view.TableView.DefaultBaseTableView

customFormat - Variable in class hdf.view.TableView.DefaultBaseTableView

D

data - Variable in class hdf.object.Dataset

The memory buffer that holds the raw data array of the dataset.

data - Variable in class hdf.view.Chart

the data values of line points or histogram

dataBuf - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

dataDisplayConverter - Variable in class hdf.view.TableView.DefaultBaseTableView

DataDisplayConverterFactory - Class in hdf.view.TableView

A Factory class to return a concrete class implementing the IDisplayConverter interface in order to convert data values into human-readable forms in a NatTable.

DataDisplayConverterFactory() - Constructor for class hdf.view.TableView.DataDisplayConverterFactory

DataDisplayConverterFactory.HDFDisplayConverter - Class in hdf.view.TableView

DataFactoryUtils - Class in hdf.view.TableView

A class containing utility functions for the various DataXXXFactory classes, such as DataProviderFactory, DataDisplayConverterFactory and DataValidatorFactory.

DataFactoryUtils() - Constructor for class hdf.view.TableView.DataFactoryUtils

DataFormat - Interface in hdf.object

An interface that provides general I/O operations for object data.

dataLayer - Variable in class hdf.view.TableView.DefaultBaseTableView

dataObject - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

The HDF data object

dataObject - Variable in class hdf.view.TableView.DefaultBaseTableView

DataOptionDialog - Class in hdf.view.dialog

DataOptionDialog is an dialog window used to select display options.

DataOptionDialog(Shell, DataFormat) - Constructor for class hdf.view.dialog.DataOptionDialog

Constructs a DataOptionDialog with the given HDFView.

dataProvider - Variable in class hdf.view.TableView.DefaultBaseTableView

DataProviderFactory - Class in hdf.view.TableView

A Factory class to return a concrete class implementing the IDataProvider interface in order to provide data for a NatTable.

DataProviderFactory() - Constructor for class hdf.view.TableView.DataProviderFactory

DataProviderFactory.HDFDataProvider - Class in hdf.view.TableView

Dataset - Class in hdf.object

The abstract class provides general APIs to create and manipulate dataset objects, and retrieve dataset properties, datatype and dimension sizes.

Dataset(FileFormat, String, String) - Constructor for class hdf.object.Dataset

Constructs a Dataset object with a given file, name and path.

Dataset(FileFormat, String, String, long[]) - Constructor for class hdf.object.Dataset

Deprecated.

Not for public use in the future.
Using Dataset(FileFormat, String, String)

dataTable - Variable in class hdf.view.TableView.DefaultBaseTableView

datatype - Variable in class hdf.object.Dataset

The datatype object of the dataset.

Datatype - Class in hdf.object

Datatype is an abstract class that defines datatype characteristics and APIs for a data type.

Datatype(int, int, int, int) - Constructor for class hdf.object.Datatype

Constructs a Datatype with specified class, size, byte order and sign.

Datatype(int, int, int, int, Datatype) - Constructor for class hdf.object.Datatype

Constructs a Datatype with specified class, size, byte order and sign.

Datatype(int, int, int, int, Datatype, Datatype) - Constructor for class hdf.object.Datatype

Constructs a Datatype with specified class, size, byte order and sign.

Datatype(FileFormat, int, int, int, int, Datatype, Datatype) - Constructor for class hdf.object.Datatype

Constructs a Datatype with specified class, size, byte order and sign.

Datatype(FileFormat, long) - Constructor for class hdf.object.Datatype

Constructs a Datatype with a given native datatype identifier.

Datatype(FileFormat, long, Datatype) - Constructor for class hdf.object.Datatype

Constructs a Datatype with a given native datatype identifier.

Datatype(FileFormat, String, String) - Constructor for class hdf.object.Datatype

Constructs a named datatype with a given file, name and path.

Datatype(FileFormat, String, String, long[]) - Constructor for class hdf.object.Datatype

Deprecated.

Not for public use in the future.
Using Datatype(FileFormat, String, String)

datatypeClass - Variable in class hdf.object.Datatype

The class of the datatype.

datatypeDescription - Variable in class hdf.object.Datatype

datatypeOrder - Variable in class hdf.object.Datatype

The byte order of the datatype.

datatypeSign - Variable in class hdf.object.Datatype

The sign of the datatype.

datatypeSize - Variable in class hdf.object.Datatype

The size (in bytes) of the datatype.

DataValidatorFactory - Class in hdf.view.TableView

A Factory class to return a DataValidator class for a NatTable instance based upon the Datatype that it is supplied.

DataValidatorFactory() - Constructor for class hdf.view.TableView.DataValidatorFactory

DataValidatorFactory.HDFDataValidator - Class in hdf.view.TableView

dataValue - Variable in class hdf.view.TableView.DefaultBaseTableView

DataView - Interface in hdf.view.DataView

The data view interface for displaying data objects

DATAVIEW_IMAGE - Static variable in interface hdf.view.DataView.DataView

The image view type

DATAVIEW_TABLE - Static variable in interface hdf.view.DataView.DataView

The table view type

DATAVIEW_UNKNOWN - Static variable in interface hdf.view.DataView.DataView

The unknown view type

DataViewFactory - Class in hdf.view.DataView

DataViewFactory() - Constructor for class hdf.view.DataView.DataViewFactory

DataViewFactoryProducer - Class in hdf.view.DataView

Following the Abstract Factory Pattern, represents a class to produce different types of DataView factory classes depending on the given DataViewType enum value.

DataViewFactoryProducer() - Constructor for class hdf.view.DataView.DataViewFactoryProducer

DataViewManager - Interface in hdf.view.DataView

Defines a list of APIs for the main HDFView windows

debug(Object) - Method in class hdf.object.HObject

Print out debug information

DEFAULT_COMPOUND_DATASET_TABLEVIEW_NAME - Static variable in class hdf.view.ViewProperties

DEFAULT_DATASET_METADATAVIEW_NAME - Static variable in class hdf.view.ViewProperties

DEFAULT_DATATYPE_METADATAVIEW_NAME - Static variable in class hdf.view.ViewProperties

DEFAULT_GROUP_METADATAVIEW_NAME - Static variable in class hdf.view.ViewProperties

Default MetaDataView class names

DEFAULT_IMAGEVIEW_NAME - Static variable in class hdf.view.ViewProperties

Default ImageView class names

DEFAULT_LINK_METADATAVIEW_NAME - Static variable in class hdf.view.ViewProperties

DEFAULT_MODULE_TEXT - Static variable in class hdf.view.ViewProperties

Text for default selection of modules

DEFAULT_PALETTEVIEW_NAME - Static variable in class hdf.view.ViewProperties

Default PaletteView class names

DEFAULT_SCALAR_ATTRIBUTE_TABLEVIEW_NAME - Static variable in class hdf.view.ViewProperties

DEFAULT_SCALAR_DATASET_TABLEVIEW_NAME - Static variable in class hdf.view.ViewProperties

Default TableView class names

DEFAULT_STRING_ATTRIBUTE_LENGTH - Static variable in class hdf.view.dialog.NewAttributeDialog

the default length of a string attribute

DEFAULT_TREEVIEW_NAME - Static variable in class hdf.view.ViewProperties

Default TreeView class names

DefaultBaseMetaDataView - Class in hdf.view.MetaDataView

DefaultBaseMetaDataView is a default implementation of the MetaDataView which is used to show data properties of an object.

DefaultBaseMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultBaseMetaDataView

DefaultBaseTableView - Class in hdf.view.TableView

DefaultBaseTableView serves as the base class for a DataView that displays HDF data in a tabular format.

DefaultBaseTableView(DataViewManager) - Constructor for class hdf.view.TableView.DefaultBaseTableView

Constructs a base TableView with no additional data properties.

DefaultBaseTableView(DataViewManager, HashMap) - Constructor for class hdf.view.TableView.DefaultBaseTableView

Constructs a base TableView with the specified data properties.

DefaultBaseTableView.ColumnHeader - Class in hdf.view.TableView

An implementation of the table's Column Header which adapts to the current font.

DefaultBaseTableView.EditingGridLayer - Class in hdf.view.TableView

An implementation of a GridLayer with support for column grouping and with editing triggered by a double click instead of a single click.

DefaultBaseTableView.RefContextMenu - Class in hdf.view.TableView

DefaultBaseTableView.RowHeader - Class in hdf.view.TableView

An implementation of the table's Row Header which adapts to the current font.

DefaultBaseTableView.RowHeaderDataProvider - Class in hdf.view.TableView

Custom Row Header data provider to set row indices based on Index Base for both Scalar Datasets and Compound Datasets.

DefaultBaseTableView.ViewType - Enum Class in hdf.view.TableView

DefaultCompoundDSTableView - Class in hdf.view.TableView

DefaultCompoundDSTableView(DataViewManager) - Constructor for class hdf.view.TableView.DefaultCompoundDSTableView

Constructs a CompoundDS TableView with no additional data properties.

DefaultCompoundDSTableView(DataViewManager, HashMap) - Constructor for class hdf.view.TableView.DefaultCompoundDSTableView

Constructs a CompoundDS TableView with the specified data properties.

DefaultDatasetMetaDataView - Class in hdf.view.MetaDataView

DefaultDatasetMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultDatasetMetaDataView

DefaultDatatypeMetaDataView - Class in hdf.view.MetaDataView

DefaultDatatypeMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultDatatypeMetaDataView

DefaultFileFilter - Class in hdf.view

A convenience implementation of FileFilter that filters out all files except for those type extensions that it knows about.

DefaultFileFilter() - Constructor for class hdf.view.DefaultFileFilter

Creates a file filter.

DefaultFileFilter(String) - Constructor for class hdf.view.DefaultFileFilter

Creates a file filter that accepts files with the given extension.

DefaultFileFilter(String[]) - Constructor for class hdf.view.DefaultFileFilter

Creates a file filter from the given string array.

DefaultFileFilter(String[], String) - Constructor for class hdf.view.DefaultFileFilter

Creates a file filter from the given string array and description.

DefaultFileFilter(String, String) - Constructor for class hdf.view.DefaultFileFilter

Creates a file filter that accepts the given file type.

DefaultGroupMetaDataView - Class in hdf.view.MetaDataView

DefaultGroupMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultGroupMetaDataView

DefaultImageView - Class in hdf.view.ImageView

ImageView displays an HDF dataset as an image.

DefaultImageView(DataViewManager) - Constructor for class hdf.view.ImageView.DefaultImageView

Constructs an ImageView.

DefaultImageView(DataViewManager, HashMap) - Constructor for class hdf.view.ImageView.DefaultImageView

Constructs an ImageView.

DefaultImageView.FlipFilter - Class in hdf.view.ImageView

FlipFilter creates image filter to flip image horizontally or vertically.

DefaultImageView.Rotate90Filter - Class in hdf.view.ImageView

DefaultImageViewFactory - Class in hdf.view.ImageView

A simple Factory class which returns concrete instances of the default ImageView.

DefaultImageViewFactory() - Constructor for class hdf.view.ImageView.DefaultImageViewFactory

DefaultLinkMetaDataView - Class in hdf.view.MetaDataView

DefaultLinkMetaDataView(Composite, DataViewManager, HObject) - Constructor for class hdf.view.MetaDataView.DefaultLinkMetaDataView

DefaultMetaDataViewFactory - Class in hdf.view.MetaDataView

A simple Factory class which returns concrete instances of the default MetaDataView, based on whether the data object is a Group, Dataset, Datatype or other form of object.

DefaultMetaDataViewFactory() - Constructor for class hdf.view.MetaDataView.DefaultMetaDataViewFactory

DefaultPaletteView - Class in hdf.view.PaletteView

Displays a dialog for viewing and change palettes.

DefaultPaletteView(Shell, DataViewManager, ImageView) - Constructor for class hdf.view.PaletteView.DefaultPaletteView

DefaultPaletteView(Shell, ImageView) - Constructor for class hdf.view.PaletteView.DefaultPaletteView

DefaultPaletteViewFactory - Class in hdf.view.PaletteView

A simple Factory class which returns concrete instances of the default PaletteView.

DefaultPaletteViewFactory() - Constructor for class hdf.view.PaletteView.DefaultPaletteViewFactory

DefaultScalarAttributeTableView - Class in hdf.view.TableView

DefaultScalarAttributeTableView(DataViewManager) - Constructor for class hdf.view.TableView.DefaultScalarAttributeTableView

DefaultScalarAttributeTableView(DataViewManager, HashMap) - Constructor for class hdf.view.TableView.DefaultScalarAttributeTableView

DefaultScalarDSTableView - Class in hdf.view.TableView

DefaultScalarDSTableView(DataViewManager) - Constructor for class hdf.view.TableView.DefaultScalarDSTableView

Constructs a ScalarDS TableView with no additional data properties.

DefaultScalarDSTableView(DataViewManager, HashMap) - Constructor for class hdf.view.TableView.DefaultScalarDSTableView

Constructs a ScalarDS TableView with the specified data properties.

DefaultTableViewFactory - Class in hdf.view.TableView

A simple Factory class which returns concrete instances of the default TableView, based on whether the data object to be viewed is a scalar or compound dataset or is an attribute.

DefaultTableViewFactory() - Constructor for class hdf.view.TableView.DefaultTableViewFactory

DefaultTreeView - Class in hdf.view.TreeView

TreeView defines APIs for opening files and displaying the file structure in a tree structure.

DefaultTreeView(Composite, DataViewManager) - Constructor for class hdf.view.TreeView.DefaultTreeView

DefaultTreeViewFactory - Class in hdf.view.TreeView

A simple Factory class which returns concrete instances of the default TreeView.

DefaultTreeViewFactory() - Constructor for class hdf.view.TreeView.DefaultTreeViewFactory

delete(HObject) - Method in class hdf.object.FileFormat

Deletes an object from a file.

delete(HObject) - Method in class hdf.object.fits.FitsFile

delete(HObject) - Method in class hdf.object.h4.H4File

Delete an object from the file.

delete(HObject) - Method in class hdf.object.h5.H5File

delete(HObject) - Method in class hdf.object.nc2.NC2File

deleteAttribute(HObject) - Method in class hdf.view.MetaDataView.DefaultBaseMetaDataView

deleteAttribute(HObject) - Method in interface hdf.view.MetaDataView.MetaDataView

Delete an attribute from a data object.

DELIMITER_COLON - Static variable in class hdf.view.ViewProperties

name of the tab delimiter

DELIMITER_COMMA - Static variable in class hdf.view.ViewProperties

name of the tab delimiter

DELIMITER_SEMI_COLON - Static variable in class hdf.view.ViewProperties

name of the tab delimiter

DELIMITER_SPACE - Static variable in class hdf.view.ViewProperties

name of the tab delimiter

DELIMITER_TAB - Static variable in class hdf.view.ViewProperties

name of the tab delimiter

depthFirstMemberList() - Method in class hdf.object.Group

DFTAG_NDG_NETCDF - Static variable in class hdf.object.h4.H4SDS

tag for netCDF datasets.

DFTAG_NDG_NETCDF - Static variable in class hdf.object.nc2.NC2Dataset

tag for netCDF datasets.

dimNames - Variable in class hdf.object.Dataset

Array of strings that represent the dimension names.

dims - Variable in class hdf.object.Dataset

The current dimension sizes of the dataset

display - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

displayToCanonicalValue(Object) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

E

EditingGridLayer(ILayer, ILayer, ILayer, ILayer) - Constructor for class hdf.view.TableView.DefaultBaseTableView.EditingGridLayer

endianChoice - Variable in class hdf.view.dialog.NewDataObjectDialog

enumMembers - Variable in class hdf.object.Datatype

The (name, value) pairs of enum members.

equals(HObject) - Method in class hdf.object.HObject

Returns whether this HObject is equal to the specified HObject by comparing their OIDs.

equals(Object) - Method in class hdf.object.Attribute

Returns whether this Attribute is equal to the specified HObject by comparing various properties.

equals(Object) - Method in class hdf.object.HObject

equalsOID(long[]) - Method in class hdf.object.HObject

Checks if the OID of the object is the same as the given object identifier within the same file.

errStr - Static variable in class hdf.view.TableView.DataFactoryUtils

exportDataset(String, Dataset, int) - Method in class hdf.object.FileFormat

Export dataset.

exportDataset(String, Dataset, int) - Method in class hdf.object.h5.H5File

Export dataset.

extend(long[]) - Method in class hdf.object.h5.H5ScalarDS

H5Dset_extent verifies that the dataset is at least of size size, extending it if necessary.

EXTRACT - Enum constant in enum class hdf.view.ViewProperties.BITMASK_OP

extractCompoundInfo(H5Datatype, String, List<String>, List<Datatype>) - Static method in class hdf.object.h5.H5Datatype

Extracts compound information into flat structure.

F

fid - Variable in class hdf.object.FileFormat

File identifier.

FILE_CREATE_DELETE - Static variable in class hdf.object.FileFormat

Flag for creating/truncating a file.

FILE_CREATE_EARLY_LIB - Static variable in class hdf.object.FileFormat

Flag to indicate if the earliest version of library is used when creating a new file.

FILE_CREATE_OPEN - Static variable in class hdf.object.FileFormat

Flag for creating/opening a file.

FILE_OBJ_SEP - Static variable in class hdf.object.FileFormat

A separator that separates file name and object name.

FILE_TYPE_BMP - Static variable in class hdf.view.Tools

Key for BMP image file type.

FILE_TYPE_GIF - Static variable in class hdf.view.Tools

Key for GIF image file type.

FILE_TYPE_HDF4 - Static variable in class hdf.object.FileFormat

Key for HDF4 file format.

FILE_TYPE_HDF5 - Static variable in class hdf.object.FileFormat

Key for HDF5 file format.

FILE_TYPE_IMAGE - Static variable in class hdf.view.Tools

Key for all image file type.

FILE_TYPE_JPEG - Static variable in class hdf.view.Tools

Key for JPEG image file type.

FILE_TYPE_NC3 - Static variable in class hdf.object.FileFormat

Key for NetCDF file format.

FILE_TYPE_PNG - Static variable in class hdf.view.Tools

Key for PNG image file type.

FILE_TYPE_TIFF - Static variable in class hdf.view.Tools

Key for TIFF image file type.

fileFormat - Variable in class hdf.object.HObject

The file which contains the object

fileFormat - Variable in class hdf.view.dialog.NewDataObjectDialog

FileFormat - Class in hdf.object

FileFormat defines general interfaces for working with files whose data is organized according to a supported format.

FileFormat(String) - Constructor for class hdf.object.FileFormat

Creates a new FileFormat instance with the given filename.

fillValue - Variable in class hdf.object.ScalarDS

The fill value of the dataset.

fillValue - Variable in class hdf.view.TableView.DefaultBaseTableView

filterNonSelectedMembers(CompoundDataFormat, Datatype) - Static method in class hdf.view.TableView.DataFactoryUtils

filters - Variable in class hdf.object.Dataset

The filters information.

findDataDist(Object, int[], double[]) - Static method in class hdf.view.Tools

Finds the distribution of data values

findMinMax(Object, double[], Object) - Static method in class hdf.view.Tools

Finds the min and max values of the data array

findObject(FileFormat, long[]) - Static method in class hdf.object.FileFormat

Finds an object by its object ID

findObject(FileFormat, String) - Static method in class hdf.object.FileFormat

Finds an object by the full path of the object (path+name)

findTreeItem(HObject) - Method in class hdf.view.TreeView.DefaultTreeView

Returns the tree item that contains the given data object.

findTreeItem(HObject) - Method in interface hdf.view.TreeView.TreeView

FitsDataset - Class in hdf.object.fits

FitsDataset describes an multi-dimension array of HDF5 scalar or atomic data types, such as byte, int, short, long, float, double and string, and operations performed on the scalar dataset

FitsDataset(FileFormat, BasicHDU, String, long[]) - Constructor for class hdf.object.fits.FitsDataset

Constructs an FitsDataset object with specific netcdf variable.

FitsDatatype - Class in hdf.object.fits

Datatype encapsulates information of a datatype.

FitsDatatype(int, int, int, int) - Constructor for class hdf.object.fits.FitsDatatype

Create an Datatype with specified class, size, byte order and sign.

FitsDatatype(long) - Constructor for class hdf.object.fits.FitsDatatype

Create a Datatype with a given fits native datatype.

FitsFile - Class in hdf.object.fits

This class provides file level APIs.

FitsFile() - Constructor for class hdf.object.fits.FitsFile

Constructs an empty FitsFile with read-only access.

FitsFile(String) - Constructor for class hdf.object.fits.FitsFile

Constructs an FitsFile object of given file name with read-only access.

FitsGroup - Class in hdf.object.fits

An H5Group represents HDF5 group, inheriting from Group.

FitsGroup(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.fits.FitsGroup

Constructs an HDF5 group with specific name, path, and parent.

fixedDataLength - Variable in class hdf.view.TableView.DefaultBaseTableView

flatNameList - Variable in class hdf.object.Attribute

A list of names of all compound fields including nested fields.

flatTypeList - Variable in class hdf.object.Attribute

A list of datatypes of all compound fields including nested fields.

FLIP_HORIZONTAL - Static variable in class hdf.view.ImageView.DefaultImageView

Horizontal direction to flip an image.

FLIP_VERTICAL - Static variable in class hdf.view.ImageView.DefaultImageView

Vertical direction to flip an image.

FlipFilter(int) - Constructor for class hdf.view.ImageView.DefaultImageView.FlipFilter

Constructs an image filter to flip horizontally or vertically.

fromNative() - Method in class hdf.object.fits.FitsDatatype

Translate fits datatype identifier into FitsDatatype.

fromNative(long) - Method in class hdf.object.Datatype

Set datatype characteristics (class, size, byte order and sign) from a given datatype identifier.

fromNative(long) - Method in class hdf.object.fits.FitsDatatype

Translate fits datatype identifier into FitsDatatype.

fromNative(long) - Method in class hdf.object.h4.H4Datatype

fromNative(long) - Method in class hdf.object.h5.H5Datatype

fromNative(long) - Method in class hdf.object.nc2.NC2Datatype

Translate NetCDF3 datatype object into NC2Datatype.

fullFileName - Variable in class hdf.object.FileFormat

The absolute pathname (path+name) of the file.

G

generalObjectInfoPane - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

get(String) - Method in class hdf.object.FileFormat

Gets the HObject with the specified path from the file.

get(String) - Method in class hdf.object.fits.FitsFile

get(String) - Method in class hdf.object.h4.H4File

Get an individual HObject with a given path.

get(String) - Method in class hdf.object.h5.H5File

get(String) - Method in class hdf.object.nc2.NC2File

getActionCommand() - Method in interface hdf.view.HelpView.HelpView

getAnimationIcon() - Static method in class hdf.view.ViewProperties

getAppsIcon() - Static method in class hdf.view.ViewProperties

getArrayDims() - Method in class hdf.object.Datatype

Returns the dimensions of an Array Datatype.

getAttribute() - Method in class hdf.view.dialog.NewAttributeDialog

getAttribute(HObject) - Static method in class hdf.object.h5.H5File

Returns a list of attributes for the specified object.

getAttribute(HObject, int, int) - Static method in class hdf.object.h5.H5File

Returns a list of attributes for the specified object, in creation or alphabetical order.

getAudioIcon() - Static method in class hdf.view.ViewProperties

getAutocontrastIcon() - Static method in class hdf.view.ViewProperties

getBinaryDataFromFile(Object, String, ByteOrder) - Static method in class hdf.view.Tools

Reads data from a binary file into a buffer.

getBitmask() - Method in class hdf.view.dialog.DataOptionDialog

getBlankIcon() - Static method in class hdf.view.ViewProperties

getBrightIcon() - Static method in class hdf.view.ViewProperties

getBytes(Object, double[], long, long, boolean, byte[]) - Static method in class hdf.view.Tools

Convert an array of raw data into array of a byte data.

getBytes(Object, double[], long, long, boolean, List<Number>, boolean, byte[]) - Static method in class hdf.view.Tools

getBytes(Object, double[], long, long, boolean, List<Number>, boolean, byte[], List<Integer>) - Static method in class hdf.view.Tools

Convert an array of raw data into array of a byte data.

getBytes(Object, double[], long, long, boolean, List<Number>, byte[]) - Static method in class hdf.view.Tools

getChartIcon() - Static method in class hdf.view.ViewProperties

getChunkSize() - Method in class hdf.object.Dataset

Returns the array that contains the dimension sizes of the chunk of the dataset.

getColumnCount() - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

getColumnCount() - Method in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider

getComponentCount() - Method in class hdf.object.h4.H4GRImage

Returns the number of components of this image data.

getCompoundMemberNames() - Method in class hdf.object.Datatype

getCompoundMemberTypes() - Method in class hdf.object.Datatype

getCompression() - Method in interface hdf.object.DataFormat

Returns the string representation of compression information.

getCompression() - Method in class hdf.object.Dataset

Returns the string representation of compression information.

getConvertByteToString() - Method in class hdf.object.Dataset

Returns the flag that indicates if a byte array is converted to a string array.

getConvertedFile() - Method in class hdf.view.dialog.ImageConversionDialog

getCopyIcon() - Static method in class hdf.view.ViewProperties

getCurrentFiles() - Method in class hdf.view.TreeView.DefaultTreeView

getCurrentFiles() - Method in interface hdf.view.TreeView.TreeView

getCurrentObject() - Method in class hdf.view.TreeView.DefaultTreeView

getCurrentObject() - Method in interface hdf.view.TreeView.TreeView

getCutIcon() - Static method in class hdf.view.ViewProperties

getData() - Method in interface hdf.object.DataFormat

Retrieves the object's data from the file.

getData() - Method in class hdf.object.Dataset

Returns the data buffer of the dataset in memory.

getDataDelimiter() - Static method in class hdf.view.ViewProperties

getDataDisplayConverter(DataFormat) - Static method in class hdf.view.TableView.DataDisplayConverterFactory

getDataEditingRule(DataFormat) - Method in class hdf.view.TableView.DefaultBaseTableView

getDataEditingRule(DataFormat) - Method in class hdf.view.TableView.DefaultCompoundDSTableView

Returns an IEditableRule that determines whether cells can be edited.

getDataEditingRule(DataFormat) - Method in class hdf.view.TableView.DefaultScalarDSTableView

Returns an IEditableRule that determines whether cells can be edited.

getDataLayer() - Method in class hdf.view.TableView.DefaultBaseTableView

getDataObject() - Method in interface hdf.view.DataView.DataView

getDataObject() - Method in class hdf.view.ImageView.DefaultImageView

getDataObject() - Method in class hdf.view.MetaDataView.DefaultBaseMetaDataView

getDataObject() - Method in class hdf.view.PaletteView.DefaultPaletteView

getDataObject() - Method in class hdf.view.TableView.DefaultBaseTableView

getDataProvider(DataFormat, Object, boolean) - Static method in class hdf.view.TableView.DataProviderFactory

getDatasetIcon() - Static method in class hdf.view.ViewProperties

getDatasetIconA() - Static method in class hdf.view.ViewProperties

getDatatype() - Method in class hdf.object.Attribute

getDatatype() - Method in interface hdf.object.DataFormat

Returns the datatype of the data object.

getDatatype() - Method in class hdf.object.Dataset

getDatatype() - Method in class hdf.object.fits.FitsDataset

getDatatype() - Method in class hdf.object.h4.H4GRImage

getDatatype() - Method in class hdf.object.h4.H4SDS

getDatatype() - Method in class hdf.object.h4.H4Vdata

getDatatype() - Method in class hdf.object.h5.H5CompoundDS

getDatatype() - Method in class hdf.object.h5.H5ScalarDS

getDatatype() - Method in class hdf.object.nc2.NC2Dataset

getDatatypeBase() - Method in class hdf.object.Datatype

Returns the base datatype for this datatype.

getDatatypeClass() - Method in class hdf.object.Datatype

Returns the class of the datatype.

getDatatypeIcon() - Static method in class hdf.view.ViewProperties

getDatatypeIconA() - Static method in class hdf.view.ViewProperties

getDatatypeOrder() - Method in class hdf.object.Datatype

Returns the byte order of the datatype.

getDatatypeSign() - Method in class hdf.object.Datatype

Returns the sign (SIGN_NONE, SIGN_2) of an integer datatype.

getDatatypeSize() - Method in class hdf.object.Datatype

Returns the size of the datatype in bytes.

getDatatypeSize(long) - Static method in class hdf.object.h5.H5Datatype

Returns the size (in bytes) of a given datatype identifier.

getDataValidator(DataFormat) - Static method in class hdf.view.TableView.DataValidatorFactory

getDataValue(int, int) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

getDataValue(int, int) - Method in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider

getDataValue(Object, int) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

getDataValue(Object, int, int) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

getDataView(HObject) - Method in interface hdf.view.DataView.DataViewManager

Returns DataView that contains the specified data object.

getDataView(HObject) - Method in class hdf.view.HDFView

getDataViewName() - Method in class hdf.view.dialog.DataOptionDialog

getDescription() - Method in class hdf.object.Datatype

Returns a short text description of this datatype.

getDescription() - Method in class hdf.object.fits.FitsDatatype

getDescription() - Method in class hdf.object.h4.H4Datatype

getDescription() - Method in class hdf.object.h5.H5Datatype

getDescription() - Method in class hdf.object.nc2.NC2Datatype

getDescription() - Method in class hdf.view.DefaultFileFilter

getDimNames() - Method in class hdf.object.Dataset

Returns the array of strings that represent the dimension names.

getDims() - Method in interface hdf.object.DataFormat

Returns the array that contains the dimension sizes of the data value of the data object.

getDims() - Method in class hdf.object.Dataset

Returns the array that contains the dimension sizes of the dataset.

getEarlyLib() - Static method in class hdf.view.ViewProperties

Returns value of default lib version for the earliest.

getEnumMembers() - Method in class hdf.object.Datatype

Returns the Map<String,String> pairs of enum members for enum datatype.

getEnumMembersAsString() - Method in class hdf.object.Datatype

Returns the HashMap pairs of enum members for enum datatype.

getExtensions() - Method in class hdf.view.DefaultFileFilter

getFactory(ViewProperties.DataViewType) - Static method in class hdf.view.DataView.DataViewFactoryProducer

getFID() - Method in class hdf.object.FileFormat

Returns file identifier of open file associated with this instance.

getFID() - Method in class hdf.object.HObject

Returns the file identifier of of the file containing the object.

getFieldCount() - Method in class hdf.object.h4.H4Vdata

Returns the number of fields.

getFieldOrders() - Method in class hdf.object.h4.H4Vdata

Returns the orders of fields

getFile() - Method in class hdf.object.HObject

Returns the name of the file that contains this data object.

getFilecloseIcon() - Static method in class hdf.view.ViewProperties

getFileExtension() - Static method in class hdf.view.ViewProperties

getFileExtensions() - Static method in class hdf.object.FileFormat

Returns a list of file extensions for all supported file formats.

getFileFilter() - Static method in class hdf.view.DefaultFileFilter

getFileFilterBinary() - Static method in class hdf.view.DefaultFileFilter

getFileFilterBMP() - Static method in class hdf.view.DefaultFileFilter

getFileFilterGIF() - Static method in class hdf.view.DefaultFileFilter

getFileFilterHDF4() - Static method in class hdf.view.DefaultFileFilter

getFileFilterHDF5() - Static method in class hdf.view.DefaultFileFilter

getFileFilterJPEG() - Static method in class hdf.view.DefaultFileFilter

getFileFilterNetCDF3() - Static method in class hdf.view.DefaultFileFilter

getFileFilterPNG() - Static method in class hdf.view.DefaultFileFilter

getFileFilterText() - Static method in class hdf.view.DefaultFileFilter

getFileFilterTIFF() - Static method in class hdf.view.DefaultFileFilter

getFileFormat() - Method in class hdf.object.HObject

Returns the file that contains the object.

getFileFormat(String) - Static method in class hdf.object.FileFormat

Returns the FileFormat with specified key from the list of supported formats.

getFileFormatKeys() - Static method in class hdf.object.FileFormat

Returns an Enumeration of keys for all supported formats.

getFileFormats() - Static method in class hdf.object.FileFormat

Returns an array of supported FileFormat instances.

getFilenewIcon() - Static method in class hdf.view.ViewProperties

getFileopenIcon() - Static method in class hdf.view.ViewProperties

getFilePath() - Method in class hdf.object.FileFormat

Returns the absolute path for the file.

getFilesaveIcon() - Static method in class hdf.view.ViewProperties

getFillValue() - Method in class hdf.object.Attribute

getFillValue() - Method in interface hdf.object.DataFormat

Returns the fill values for the data object.

getFillValue() - Method in class hdf.object.h4.H4Vdata

getFillValue() - Method in class hdf.object.h5.H5CompoundDS

getFillValue() - Method in class hdf.object.ScalarDS

Returns the fill values for the dataset.

getFilteredImageValues() - Method in class hdf.object.ScalarDS

Get a list of values that will be filtered out in an image.

getFilters() - Method in class hdf.object.Dataset

Returns the string representation of filter information.

getFirstIcon() - Static method in class hdf.view.ViewProperties

getFitsFile() - Method in class hdf.object.fits.FitsFile

getFoldercloseIcon() - Static method in class hdf.view.ViewProperties

getFoldercloseIconA() - Static method in class hdf.view.ViewProperties

getFolderopenIcon() - Static method in class hdf.view.ViewProperties

getFolderopenIconA() - Static method in class hdf.view.ViewProperties

getFontSize() - Static method in class hdf.view.ViewProperties

getFontType() - Static method in class hdf.view.ViewProperties

getFullName() - Method in class hdf.object.HObject

Returns the full name (group path + object name) of the object.

getGRAccessID() - Method in class hdf.object.h4.H4File

Returns the GR identifier, which is returned from GRstart(fid).

getH4Icon() - Static method in class hdf.view.ViewProperties

getH4IconR() - Static method in class hdf.view.ViewProperties

getH4toH5() - Static method in class hdf.view.ViewProperties

getH5Icon() - Static method in class hdf.view.ViewProperties

getH5IconR() - Static method in class hdf.view.ViewProperties

getHDF5UserBlock(String) - Static method in class hdf.view.Tools

Read HDF5 user block data into byte array.

getHdfIcon() - Static method in class hdf.view.ViewProperties

getHeight() - Method in interface hdf.object.DataFormat

Returns the dimension size of the vertical axis.

getHeight() - Method in class hdf.object.Dataset

Returns the dimension size of the vertical axis.

getHelpIcon() - Static method in class hdf.view.ViewProperties

getHelpViewList() - Static method in class hdf.view.ViewProperties

getHObject(String) - Static method in class hdf.object.FileFormat

Deprecated.

As of 2.4, replaced by FileFormat.get(String)

This static method, which as been deprecated, causes two problems:

• It can be very expensive if it is called many times or in a loop because each call to the method creates an instance of a file.
• Since the method does not return the instance of the file, the file cannot be closed directly and may be left open (memory leak). The only way to close the file is through the object returned by this method.

getHObject(String, String) - Static method in class hdf.object.FileFormat

Deprecated.

As of 2.4, replaced by FileFormat.get(String)

This static method, which as been deprecated, causes two problems:

• It can be very expensive if it is called many times or in a loop because each call to the method creates an instance of a file.
• Since the method does not return the instance of the file, the file cannot be closed directly and may be left open (memory leak). The only way to close the file is through the object returned by this method, for example:

   Dataset dset = H5File.getObject("hdf5_test.h5", "/images/iceburg");
   ...
   // close the file through dset
   dset.getFileFormat().close();
   

getImage() - Method in class hdf.view.ImageView.DefaultImageView

getImage() - Method in interface hdf.view.ImageView.ImageView

getImageByteData() - Method in class hdf.view.ImageView.DefaultImageView

getImageByteData() - Method in interface hdf.view.ImageView.ImageView

getImageDataRange() - Method in class hdf.object.ScalarDS

Returns the (min, max) pair of image data range.

getImageFileFilter() - Static method in class hdf.view.DefaultFileFilter

getImageIcon() - Static method in class hdf.view.ViewProperties

getImageIconA() - Static method in class hdf.view.ViewProperties

getImageOrigin() - Static method in class hdf.view.ViewProperties

getImageView(DataViewManager, HashMap) - Method in class hdf.view.DataView.DataViewFactory

getImageView(DataViewManager, HashMap) - Method in class hdf.view.ImageView.DefaultImageViewFactory

getImageView(DataViewManager, HashMap) - Method in class hdf.view.MetaDataView.MetaDataViewFactory

getImageView(DataViewManager, HashMap) - Method in class hdf.view.PaletteView.PaletteViewFactory

getImageView(DataViewManager, HashMap) - Method in class hdf.view.TableView.TableViewFactory

getImageView(DataViewManager, HashMap) - Method in class hdf.view.TreeView.TreeViewFactory

getImageViewList() - Static method in class hdf.view.ViewProperties

getIndexOrder() - Method in class hdf.object.h5.H5File

getIndexOrder() - Static method in class hdf.view.ViewProperties

getIndexOrder(String) - Method in class hdf.object.FileFormat

getIndexOrder(String) - Method in class hdf.object.h4.H4File

getIndexOrder(String) - Method in class hdf.object.h5.H5File

getIndexOrderValue(String) - Static method in class hdf.object.FileFormat

getIndexOrderValue(String) - Static method in class hdf.object.h5.H5File

getIndexType() - Method in class hdf.object.h5.H5File

getIndexType() - Static method in class hdf.view.ViewProperties

getIndexType(String) - Method in class hdf.object.FileFormat

getIndexType(String) - Method in class hdf.object.h4.H4File

getIndexType(String) - Method in class hdf.object.h5.H5File

getIndexTypeValue(String) - Static method in class hdf.object.FileFormat

getIndexTypeValue(String) - Static method in class hdf.object.h5.H5File

getInstance(String) - Static method in class hdf.object.FileFormat

Creates a FileFormat instance for the specified file.

getInterlace() - Method in class hdf.object.ScalarDS

Returns the interlace mode of a true color image (RGB).

getIsValueChanged() - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

getJavaObjectRuntimeClass(Object) - Static method in class hdf.object.Utils

Retrieves the Java Runtime Class of the given Object.

getLabel() - Method in interface hdf.view.HelpView.HelpView

getLargeHdfIcon() - Static method in class hdf.view.ViewProperties

getLastIcon() - Static method in class hdf.view.ViewProperties

getLateLib() - Static method in class hdf.view.ViewProperties

Returns value of default lib version for the latest.

getLibBounds() - Method in class hdf.object.FileFormat

Gets the bounds of library versions

getLibBounds() - Method in class hdf.object.h5.H5File

Gets the bounds of library versions.

getLibBoundsDescription() - Method in class hdf.object.FileFormat

getLibBoundsDescription() - Method in class hdf.object.h5.H5File

Gets the bounds of library versions as text.

getLibversion() - Method in class hdf.object.FileFormat

Returns the version of the library for the implementing FileFormat class.

getLibversion() - Method in class hdf.object.fits.FitsFile

Returns the version of the library.

getLibversion() - Method in class hdf.object.h4.H4File

Returns the version of the HDF4 library.

getLibversion() - Method in class hdf.object.h5.H5File

Returns the version of the HDF5 library.

getLibversion() - Method in class hdf.object.nc2.NC2File

Returns the version of the library.

getLinkIcon() - Static method in class hdf.view.ViewProperties

getLinkTargetName(HObject) - Static method in class hdf.object.h5.H5File

Retrieves the name of the target object that is being linked to.

getLinkTargetObjName() - Method in class hdf.object.HObject

Returns the name of the target object that is linked to.

getListOfImageViews() - Static method in class hdf.view.HDFView

getListOfMetaDataViews() - Static method in class hdf.view.HDFView

getListOfPaletteViews() - Static method in class hdf.view.HDFView

getListOfTableViews() - Static method in class hdf.view.HDFView

getListOfTreeViews() - Static method in class hdf.view.HDFView

getMaxDims() - Method in class hdf.object.Dataset

Returns the array that contains the max dimension sizes of the dataset.

getMaxMembers() - Method in class hdf.object.FileFormat

Returns the maximum number of objects that can be loaded into memory.

getMaxMembers() - Static method in class hdf.view.ViewProperties

Current Java applications such as HDFView cannot handle files with large number of objects such as 1,000,000 objects.

getMaxRecentFiles() - Static method in class hdf.view.ViewProperties

getMember(int) - Method in class hdf.object.Group

Get the HObject at the specified index in this Group's member list.

getMemberCount() - Method in class hdf.object.Attribute

Returns the number of members of the compound attribute.

getMemberCount() - Method in interface hdf.object.CompoundDataFormat

Returns the number of members of the compound data object.

getMemberCount() - Method in class hdf.object.CompoundDS

Returns the number of members of the compound dataset.

getMemberDims(int) - Method in class hdf.object.Attribute

Returns the dimension sizes of the i-th member.

getMemberDims(int) - Method in interface hdf.object.CompoundDataFormat

Returns the dimension sizes of the i-th member.

getMemberDims(int) - Method in class hdf.object.CompoundDS

Returns the dimension sizes of the i-th member.

getMemberList() - Method in class hdf.object.Group

Returns the list of members of this group.

getMemberNames() - Method in class hdf.object.Attribute

Returns the names of the members of the compound attribute.

getMemberNames() - Method in interface hdf.object.CompoundDataFormat

Returns the names of the members of the compound data object.

getMemberNames() - Method in class hdf.object.CompoundDS

Returns the names of the members of the compound dataset.

getMemberOrders() - Method in class hdf.object.Attribute

Returns array containing the total number of elements of the members of the compound attribute.

getMemberOrders() - Method in interface hdf.object.CompoundDataFormat

Returns array containing the total number of elements of the members of the compound data object.

getMemberOrders() - Method in class hdf.object.CompoundDS

Returns array containing the total number of elements of the members of the compound dataset.

getMemberTypes() - Method in class hdf.object.Attribute

Returns an array of datatype objects of compound members.

getMemberTypes() - Method in interface hdf.object.CompoundDataFormat

Returns an array of datatype objects of the compound members.

getMemberTypes() - Method in class hdf.object.CompoundDS

Returns an array of datatype objects of compound members.

getMetadata() - Method in class hdf.object.Attribute

getMetadata() - Method in class hdf.object.Datatype

getMetadata() - Method in class hdf.object.fits.FitsDataset

getMetadata() - Method in class hdf.object.fits.FitsGroup

getMetadata() - Method in class hdf.object.h4.H4GRImage

getMetadata() - Method in class hdf.object.h4.H4Group

getMetadata() - Method in class hdf.object.h4.H4SDS

getMetadata() - Method in class hdf.object.h4.H4Vdata

getMetadata() - Method in class hdf.object.h5.H5CompoundDS

getMetadata() - Method in class hdf.object.h5.H5Datatype

getMetadata() - Method in class hdf.object.h5.H5Group

getMetadata() - Method in class hdf.object.h5.H5Link

getMetadata() - Method in class hdf.object.h5.H5ScalarDS

getMetadata() - Method in interface hdf.object.MetaDataContainer

Retrieves the object's metadata, such as attributes, from the file.

getMetadata() - Method in class hdf.object.nc2.NC2Dataset

getMetadata() - Method in class hdf.object.nc2.NC2Group

getMetadata(int...) - Method in class hdf.object.fits.FitsDataset

getMetadata(int...) - Method in class hdf.object.fits.FitsDatatype

getMetadata(int...) - Method in class hdf.object.fits.FitsGroup

getMetadata(int...) - Method in class hdf.object.h4.H4Datatype

getMetadata(int...) - Method in class hdf.object.h4.H4GRImage

getMetadata(int...) - Method in class hdf.object.h4.H4Group

getMetadata(int...) - Method in class hdf.object.h4.H4SDS

getMetadata(int...) - Method in class hdf.object.h4.H4Vdata

getMetadata(int...) - Method in class hdf.object.h5.H5CompoundDS

getMetadata(int...) - Method in class hdf.object.h5.H5Datatype

getMetadata(int...) - Method in class hdf.object.h5.H5Group

getMetadata(int...) - Method in class hdf.object.h5.H5Link

getMetadata(int...) - Method in class hdf.object.h5.H5ScalarDS

getMetadata(int...) - Method in class hdf.object.nc2.NC2Dataset

getMetadata(int...) - Method in class hdf.object.nc2.NC2Datatype

getMetadata(int...) - Method in class hdf.object.nc2.NC2Group

getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.DataView.DataViewFactory

getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.ImageView.ImageViewFactory

getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.MetaDataView.DefaultMetaDataViewFactory

getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.PaletteView.PaletteViewFactory

getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.TableView.TableViewFactory

getMetaDataView(Composite, DataViewManager, HObject) - Method in class hdf.view.TreeView.TreeViewFactory

getMetaDataViewList() - Static method in class hdf.view.ViewProperties

getMRF() - Static method in class hdf.view.ViewProperties

getName() - Method in class hdf.object.HObject

Returns the name of the object.

getNativeStrPad() - Method in class hdf.object.h5.H5Datatype

getNC3Icon() - Static method in class hdf.view.ViewProperties

getNC3IconR() - Static method in class hdf.view.ViewProperties

getNetcdfFile() - Method in class hdf.object.nc2.NC2File

getNetCDFGroup() - Method in class hdf.object.nc2.NC2Group

getNextIcon() - Static method in class hdf.view.ViewProperties

getNumberOfMembers() - Method in class hdf.object.FileFormat

Returns the number of objects in memory.

getNumberOfMembersInFile() - Method in class hdf.object.Group

Returns the total number of members of this group in file.

getNumberOfMembersInFile() - Method in class hdf.object.h5.H5Group

getObject() - Method in class hdf.view.dialog.NewDataObjectDialog

getObject() - Method in class hdf.view.dialog.NewLinkDialog

getOID() - Method in class hdf.object.HObject

Returns a cloned copy of the object identifier.

getOriginalClass() - Method in interface hdf.object.DataFormat

Get runtime Class of the original data buffer if converted.

getOriginalClass() - Method in class hdf.object.Dataset

Get Class of the original data buffer if converted.

getPalette() - Method in class hdf.object.fits.FitsDataset

getPalette() - Method in class hdf.object.h4.H4GRImage

getPalette() - Method in class hdf.object.h4.H4SDS

getPalette() - Method in class hdf.object.h5.H5ScalarDS

getPalette() - Method in class hdf.object.nc2.NC2Dataset

getPalette() - Method in class hdf.object.ScalarDS

Returns the palette of this scalar dataset or null if palette does not exist.

getPalette() - Method in class hdf.view.ImageView.DefaultImageView

getPalette() - Method in interface hdf.view.ImageView.ImageView

getPaletteIcon() - Static method in class hdf.view.ViewProperties

getPaletteList() - Static method in class hdf.view.ViewProperties

getPaletteName(int) - Method in class hdf.object.h5.H5ScalarDS

getPaletteName(int) - Method in class hdf.object.ScalarDS

Get the name of a specific image palette from file.

getPaletteRefs() - Method in class hdf.object.fits.FitsDataset

getPaletteRefs() - Method in class hdf.object.h4.H4GRImage

getPaletteRefs() - Method in class hdf.object.h4.H4SDS

getPaletteRefs() - Method in class hdf.object.h5.H5ScalarDS

getPaletteRefs() - Method in class hdf.object.nc2.NC2Dataset

returns the byte array of palette refs.

getPaletteRefs() - Method in class hdf.object.ScalarDS

Returns the byte array of palette refs.

getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.DataView.DataViewFactory

getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.ImageView.ImageViewFactory

getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.MetaDataView.MetaDataViewFactory

getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.PaletteView.DefaultPaletteViewFactory

getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.TableView.TableViewFactory

getPaletteView(Shell, DataViewManager, ImageView) - Method in class hdf.view.TreeView.TreeViewFactory

getPaletteViewList() - Static method in class hdf.view.ViewProperties

getParent() - Method in class hdf.object.Group

getParentGroup() - Method in class hdf.view.dialog.NewDataObjectDialog

getParentGroup() - Method in class hdf.view.dialog.NewLinkDialog

getParentObject() - Method in class hdf.object.Attribute

Returns the HObject to which this Attribute is currently "attached".

getPasteIcon() - Static method in class hdf.view.ViewProperties

getPath() - Method in class hdf.object.HObject

Returns the group path of the object.

getPdfIcon() - Static method in class hdf.view.ViewProperties

getPreviousIcon() - Static method in class hdf.view.ViewProperties

getProperty(String) - Method in class hdf.object.Attribute

get a property for a given key.

getPropertyFile() - Static method in class hdf.view.ViewProperties

getPropertyKeys() - Method in class hdf.object.Attribute

get all property keys.

getPropertyVersionHDF4() - Static method in class hdf.HDFVersions

getPropertyVersionHDF5() - Static method in class hdf.HDFVersions

getPropertyVersionJava() - Static method in class hdf.HDFVersions

getPropertyVersionView() - Static method in class hdf.HDFVersions

getQuestionIcon() - Static method in class hdf.view.ViewProperties

getRank() - Method in interface hdf.object.DataFormat

Returns the rank (number of dimensions) of the data object.

getRank() - Method in class hdf.object.Dataset

Returns the rank (number of dimensions) of the dataset.

getRecordCount() - Method in class hdf.object.h4.H4Vdata

Returns the number of records.

getReferenceType() - Method in class hdf.object.Datatype

If the datatype is a reference, then return the type.

getReferenceType() - Method in class hdf.object.h5.H5Datatype

getRootObject() - Method in class hdf.object.FileFormat

Returns the root object for the file associated with this instance.

getRootObject() - Method in class hdf.object.fits.FitsFile

getRootObject() - Method in class hdf.object.h4.H4File

getRootObject() - Method in class hdf.object.h5.H5File

Returns the root object of the open HDF5 File.

getRootObject() - Method in class hdf.object.nc2.NC2File

getRowCount() - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

getRowCount() - Method in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider

getSDAccessID() - Method in class hdf.object.h4.H4File

Returns the SDS identifier, which is returned from SDstart(fname, flag).

getSelectedArea() - Method in class hdf.view.ImageView.DefaultImageView

returns the selected area of the image

getSelectedArea() - Method in interface hdf.view.ImageView.ImageView

Returns the selected area of the image

getSelectedColumnCount() - Method in class hdf.view.TableView.DefaultBaseTableView

getSelectedColumnCount() - Method in interface hdf.view.TableView.TableView

getSelectedData() - Method in class hdf.view.ImageView.DefaultImageView

Returns the selected data values.

getSelectedData() - Method in interface hdf.view.ImageView.ImageView

getSelectedData() - Method in class hdf.view.TableView.DefaultCompoundDSTableView

getSelectedData() - Method in class hdf.view.TableView.DefaultScalarDSTableView

Returns the selected data values of the ScalarDS

getSelectedData() - Method in interface hdf.view.TableView.TableView

getSelectedDims() - Method in interface hdf.object.DataFormat

Returns the dimension sizes of the selected subset.

getSelectedDims() - Method in class hdf.object.Dataset

Returns the dimension sizes of the selected subset.

getSelectedFile() - Method in class hdf.view.TreeView.DefaultTreeView

Gets the selected file.

getSelectedFile() - Method in interface hdf.view.TreeView.TreeView

Gets the selected the file.

getSelectedIndex() - Method in interface hdf.object.DataFormat

Returns the indices of display order.

getSelectedIndex() - Method in class hdf.object.Dataset

Returns the indices of display order.

getSelectedMemberCount() - Method in class hdf.object.Attribute

Returns the number of selected members of the compound attribute.

getSelectedMemberCount() - Method in interface hdf.object.CompoundDataFormat

Returns the number of selected members of the compound data object.

getSelectedMemberCount() - Method in class hdf.object.CompoundDS

Returns the number of selected members of the compound dataset.

getSelectedMemberNames() - Method in class hdf.object.Attribute

Returns an array of the names of the selected members of the compound dataset.

getSelectedMemberNames() - Method in interface hdf.object.CompoundDataFormat

Returns an array of the names of the selected compound members.

getSelectedMemberNames() - Method in class hdf.object.CompoundDS

Returns an array of the names of the selected members of the compound dataset.

getSelectedMemberOrders() - Method in class hdf.object.Attribute

Returns array containing the total number of elements of the selected members of the compound attribute.

getSelectedMemberOrders() - Method in interface hdf.object.CompoundDataFormat

Returns array containing the total number of elements of the selected members of the compound data object.

getSelectedMemberOrders() - Method in class hdf.object.CompoundDS

Returns array containing the total number of elements of the selected members of the compound dataset.

getSelectedMemberTypes() - Method in class hdf.object.Attribute

Returns an array of datatype objects of selected compound members.

getSelectedMemberTypes() - Method in interface hdf.object.CompoundDataFormat

Returns an array of datatype objects of the selected compound members.

getSelectedMemberTypes() - Method in class hdf.object.CompoundDS

Returns an array of datatype objects of selected compound members.

getSelectedRowCount() - Method in class hdf.view.TableView.DefaultBaseTableView

getSelectedRowCount() - Method in interface hdf.view.TableView.TableView

getSelectionLayer() - Method in class hdf.view.TableView.DefaultBaseTableView

getSize(long) - Method in class hdf.object.Dataset

Returns the size in bytes of a given datatype.

getSize(long) - Method in class hdf.object.h5.H5CompoundDS

getSrbAccount() - Static method in class hdf.view.ViewProperties

getStartDims() - Method in interface hdf.object.DataFormat

Returns the starting position of a selected subset.

getStartDims() - Method in class hdf.object.Dataset

Returns the starting position of a selected subset.

getStartMembers() - Method in class hdf.object.FileFormat

Returns the index of the starting object to be loaded into memory.

getStartMembers() - Static method in class hdf.view.ViewProperties

Current Java applications such as HDFView cannot handle files with large number of objects such as 1,000,000 objects.

getStorage() - Method in class hdf.object.Dataset

Returns the string representation of storage information.

getStorageLayout() - Method in class hdf.object.Dataset

Returns the string representation of storage layout information.

getStride() - Method in interface hdf.object.DataFormat

Returns the selectedStride of the selected dataset.

getStride() - Method in class hdf.object.Dataset

Returns the selectedStride of the selected dataset.

getTable() - Method in class hdf.view.TableView.DefaultBaseTableView

getTable() - Method in interface hdf.view.TableView.TableView

getTableIcon() - Static method in class hdf.view.ViewProperties

getTableIconA() - Static method in class hdf.view.ViewProperties

getTableView(DataViewManager, HashMap) - Method in class hdf.view.DataView.DataViewFactory

getTableView(DataViewManager, HashMap) - Method in class hdf.view.ImageView.ImageViewFactory

getTableView(DataViewManager, HashMap) - Method in class hdf.view.MetaDataView.MetaDataViewFactory

getTableView(DataViewManager, HashMap) - Method in class hdf.view.PaletteView.PaletteViewFactory

getTableView(DataViewManager, HashMap) - Method in class hdf.view.TableView.DefaultTableViewFactory

getTableView(DataViewManager, HashMap) - Method in class hdf.view.TreeView.TreeViewFactory

getTableViewList() - Static method in class hdf.view.ViewProperties

getTestState() - Method in class hdf.view.HDFView

getTextIcon() - Static method in class hdf.view.ViewProperties

getTextIconA() - Static method in class hdf.view.ViewProperties

getTotalSelectedSpacePoints(long, long[], long[], long[], long[], long[]) - Static method in class hdf.object.h5.H5Utils

getTree() - Method in class hdf.view.TreeView.DefaultTreeView

getTree() - Method in interface hdf.view.TreeView.TreeView

getTreeView() - Method in interface hdf.view.DataView.DataViewManager

getTreeView() - Method in class hdf.view.HDFView

getTreeView(Composite, DataViewManager) - Method in class hdf.view.DataView.DataViewFactory

getTreeView(Composite, DataViewManager) - Method in class hdf.view.ImageView.ImageViewFactory

getTreeView(Composite, DataViewManager) - Method in class hdf.view.MetaDataView.MetaDataViewFactory

getTreeView(Composite, DataViewManager) - Method in class hdf.view.PaletteView.PaletteViewFactory

getTreeView(Composite, DataViewManager) - Method in class hdf.view.TableView.TableViewFactory

getTreeView(Composite, DataViewManager) - Method in class hdf.view.TreeView.DefaultTreeViewFactory

getTreeViewList() - Static method in class hdf.view.ViewProperties

getUrlBar() - Method in class hdf.view.HDFView

getUrlIcon() - Static method in class hdf.view.ViewProperties

getUsersGuide() - Static method in class hdf.view.ViewProperties

getVideoIcon() - Static method in class hdf.view.ViewProperties

getViewRoot() - Static method in class hdf.view.ViewProperties

getVirtualFilename(int) - Method in class hdf.object.Dataset

getVirtualFilename(int) - Method in class hdf.object.h5.H5CompoundDS

getVirtualFilename(int) - Method in class hdf.object.h5.H5ScalarDS

getVirtualMaps() - Method in class hdf.object.Dataset

getVirtualMaps() - Method in class hdf.object.h5.H5CompoundDS

getVirtualMaps() - Method in class hdf.object.h5.H5ScalarDS

getWidth() - Method in interface hdf.object.DataFormat

Returns the dimension size of the horizontal axis.

getWidth() - Method in class hdf.object.Dataset

Returns the dimension size of the horizontal axis.

getWorkDir() - Static method in class hdf.view.ViewProperties

getXlsIcon() - Static method in class hdf.view.ViewProperties

getZoominIcon() - Static method in class hdf.view.ViewProperties

getZoomoutIcon() - Static method in class hdf.view.ViewProperties

Group - Class in hdf.object

Group is an abstract class.

Group(FileFormat, String, String, Group) - Constructor for class hdf.object.Group

Constructs an instance of the group with specific name, path and parent group.

Group(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.Group

Deprecated.

Not for public use in the future.
Using Group(FileFormat, String, String, Group)

H

H4Attribute - Class in hdf.object.h4

An attribute is a (name, value) pair of metadata attached to a primary data object such as a dataset, group or named datatype.

H4Attribute(HObject, String, Datatype, long[]) - Constructor for class hdf.object.h4.H4Attribute

Create an attribute with specified name, data type and dimension sizes.

H4Attribute(HObject, String, Datatype, long[], Object) - Constructor for class hdf.object.h4.H4Attribute

Create an attribute with specific name and value.

H4Datatype - Class in hdf.object.h4

This class defines HDF4 data type characteristics and APIs for a data type.

H4Datatype(int, int, int, int) - Constructor for class hdf.object.h4.H4Datatype

Constructs a H4Datatype with specified class, size, byte order and sign.

H4Datatype(long) - Constructor for class hdf.object.h4.H4Datatype

Constructs a H4Datatype with a given native datatype identifier.

H4File - Class in hdf.object.h4

This class provides file level APIs.

H4File() - Constructor for class hdf.object.h4.H4File

Creates an H4File with read write access.

H4File(String) - Constructor for class hdf.object.h4.H4File

Creates an H4File with read write access.

H4File(String, int) - Constructor for class hdf.object.h4.H4File

Creates an H4File instance with specified file name and access.

H4GRImage - Class in hdf.object.h4

H4GRImage describes an HDF4 general raster(GR) image and operations performed on the GR image.

H4GRImage(FileFormat, String, String) - Constructor for class hdf.object.h4.H4GRImage

H4GRImage(FileFormat, String, String, long[]) - Constructor for class hdf.object.h4.H4GRImage

Creates a H4GRImage object with specific name, path, and object ID.

H4Group - Class in hdf.object.h4

An H4Group is a vgroup in HDF4, inheriting from Group.

H4Group(FileFormat, String, String, Group) - Constructor for class hdf.object.h4.H4Group

H4Group(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.h4.H4Group

Creates a group object with specific name, path, and parent.

H4SDS - Class in hdf.object.h4

H4SDS describes HDF4 Scientific Data Sets (SDS) and operations performed on the SDS.

H4SDS(FileFormat, String, String) - Constructor for class hdf.object.h4.H4SDS

H4SDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.h4.H4SDS

Creates an H4SDS object with specific name and path.

H4Vdata - Class in hdf.object.h4

H4Vdata describes a multi-dimension array of HDF4 vdata, inheriting CompoundDS.

H4Vdata(FileFormat, String, String) - Constructor for class hdf.object.h4.H4Vdata

H4Vdata(FileFormat, String, String, long[]) - Constructor for class hdf.object.h4.H4Vdata

Creates an H4Vdata object with specific name and path.

H5Attribute - Class in hdf.object.h5

An attribute is a (name, value) pair of metadata attached to a primary data object such as a dataset, group or named datatype.

H5Attribute(HObject, String, Datatype, long[]) - Constructor for class hdf.object.h5.H5Attribute

Create an attribute with specified name, data type and dimension sizes.

H5Attribute(HObject, String, Datatype, long[], Object) - Constructor for class hdf.object.h5.H5Attribute

Create an attribute with specific name and value.

H5CompoundDS - Class in hdf.object.h5

The H5CompoundDS class defines an HDF5 dataset of compound datatypes.

H5CompoundDS(FileFormat, String, String) - Constructor for class hdf.object.h5.H5CompoundDS

Constructs an instance of a HDF5 compound dataset with given file, dataset name and path.

H5CompoundDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.h5.H5CompoundDS

Deprecated.

Not for public use in the future.
Using H5CompoundDS(FileFormat, String, String)

H5CompoundDS.IO_TYPE - Enum Class in hdf.object.h5

H5Datatype - Class in hdf.object.h5

This class defines HDF5 datatype characteristics and APIs for a data type.

H5Datatype(int, int, int, int) - Constructor for class hdf.object.h5.H5Datatype

Constructs a Datatype with specified class, size, byte order and sign.

H5Datatype(int, int, int, int, Datatype) - Constructor for class hdf.object.h5.H5Datatype

Constructs a Datatype with specified class, size, byte order and sign.

H5Datatype(int, int, int, int, Datatype, Datatype) - Constructor for class hdf.object.h5.H5Datatype

Constructs a Datatype with specified class, size, byte order and sign.

H5Datatype(FileFormat, long) - Constructor for class hdf.object.h5.H5Datatype

Constructs a Datatype with a given native datatype identifier.

H5Datatype(FileFormat, long, Datatype) - Constructor for class hdf.object.h5.H5Datatype

Constructs a Datatype with a given native datatype identifier.

H5Datatype(FileFormat, String, String) - Constructor for class hdf.object.h5.H5Datatype

Constructs an named HDF5 data type object for a given file, dataset name and group path.

H5Datatype(FileFormat, String, String, long[]) - Constructor for class hdf.object.h5.H5Datatype

Deprecated.

Not for public use in the future.
Using H5Datatype(FileFormat, String, String)

H5File - Class in hdf.object.h5

H5File is an implementation of the FileFormat class for HDF5 files.

H5File() - Constructor for class hdf.object.h5.H5File

Constructs an H5File instance with an empty file name and read-only access.

H5File(String) - Constructor for class hdf.object.h5.H5File

Constructs an H5File instance with specified file name and read/write access.

H5File(String, int) - Constructor for class hdf.object.h5.H5File

Constructs an H5File instance with specified file name and access.

H5Group - Class in hdf.object.h5

An H5Group object represents an existing HDF5 group in file.

H5Group(FileFormat, String, String, Group) - Constructor for class hdf.object.h5.H5Group

Constructs an HDF5 group with specific name, path, and parent.

H5Group(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.h5.H5Group

Deprecated.

Not for public use in the future.
Using H5Group(FileFormat, String, String, Group)

H5Link - Class in hdf.object.h5

An H5Link object represents an existing HDF5 object in file.

H5Link(FileFormat, String, String) - Constructor for class hdf.object.h5.H5Link

Constructs an HDF5 link with specific name, path, and parent.

H5Link(FileFormat, String, String, long[]) - Constructor for class hdf.object.h5.H5Link

H5ScalarDS - Class in hdf.object.h5

H5ScalarDS describes a multi-dimension array of HDF5 scalar or atomic data types, such as byte, int, short, long, float, double and string, and operations performed on the scalar dataset.

H5ScalarDS(FileFormat, String, String) - Constructor for class hdf.object.h5.H5ScalarDS

Constructs an instance of a H5 scalar dataset with given file, dataset name and path.

H5ScalarDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.h5.H5ScalarDS

Deprecated.

Not for public use in the future.
Using H5ScalarDS(FileFormat, String, String)

H5ScalarDS.IO_TYPE - Enum Class in hdf.object.h5

H5Utils - Class in hdf.object.h5

H5Utils() - Constructor for class hdf.object.h5.H5Utils

hasAlpha(Image) - Static method in class hdf.view.Tools

This method returns true if the specified image has transparent pixels.

hasAttribute() - Method in class hdf.object.Attribute

hasAttribute() - Method in class hdf.object.fits.FitsDataset

hasAttribute() - Method in class hdf.object.fits.FitsDatatype

hasAttribute() - Method in class hdf.object.fits.FitsGroup

hasAttribute() - Method in class hdf.object.h4.H4Datatype

hasAttribute() - Method in class hdf.object.h4.H4GRImage

hasAttribute() - Method in class hdf.object.h4.H4Group

hasAttribute() - Method in class hdf.object.h4.H4SDS

hasAttribute() - Method in class hdf.object.h4.H4Vdata

hasAttribute() - Method in class hdf.object.h5.H5CompoundDS

hasAttribute() - Method in class hdf.object.h5.H5Datatype

hasAttribute() - Method in class hdf.object.h5.H5Group

hasAttribute() - Method in class hdf.object.h5.H5Link

hasAttribute() - Method in class hdf.object.h5.H5ScalarDS

hasAttribute() - Method in interface hdf.object.MetaDataContainer

Check if the object has any attributes attached.

hasAttribute() - Method in class hdf.object.nc2.NC2Dataset

hasAttribute() - Method in class hdf.object.nc2.NC2Datatype

hasAttribute() - Method in class hdf.object.nc2.NC2Group

hasDimension() - Method in class hdf.object.nc2.NC2Group

hashCode() - Method in class hdf.object.Attribute

hashCode() - Method in class hdf.object.HObject

hdf - package hdf

hdf.object - package hdf.object

hdf.object.fits - package hdf.object.fits

hdf.object.h4 - package hdf.object.h4

hdf.object.h5 - package hdf.object.h5

hdf.object.nc2 - package hdf.object.nc2

hdf.view - package hdf.view

hdf.view.DataView - package hdf.view.DataView

hdf.view.dialog - package hdf.view.dialog

hdf.view.HelpView - package hdf.view.HelpView

hdf.view.ImageView - package hdf.view.ImageView

hdf.view.MetaDataView - package hdf.view.MetaDataView

hdf.view.PaletteView - package hdf.view.PaletteView

hdf.view.TableView - package hdf.view.TableView

hdf.view.TreeView - package hdf.view.TreeView

HDFDataProvider(Datatype, Object, boolean) - Constructor for class hdf.view.TableView.DataProviderFactory.HDFDataProvider

HDFDataValidator(Datatype) - Constructor for class hdf.view.TableView.DataValidatorFactory.HDFDataValidator

HDFDisplayConverter(Datatype) - Constructor for class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

HDFVersions - Class in hdf

HDFVersions() - Constructor for class hdf.HDFVersions

HDFView - Class in hdf.view

HDFView is the main class of this HDF visual tool.

HDFView(String, String) - Constructor for class hdf.view.HDFView

Constructs HDFView with a given root directory, where the HDFView is installed, and opens the given files in the viewer.

HelpView - Interface in hdf.view.HelpView

The helpview interface for displaying user help information

HEXCHARS - Static variable in class hdf.view.Tools

HISTOGRAM - Static variable in class hdf.view.Chart

histogram style chart

HObject - Class in hdf.object

The HObject class is the root class of all the HDF data objects.

HObject() - Constructor for class hdf.object.HObject

Constructs an instance of a data object without name and path.

HObject(FileFormat, String, String) - Constructor for class hdf.object.HObject

Constructs an instance of a data object with specific name and path.

HObject(FileFormat, String, String, long[]) - Constructor for class hdf.object.HObject

Deprecated.

I

IMAGE - Enum constant in enum class hdf.view.TableView.DefaultBaseTableView.ViewType

IMAGE - Enum constant in enum class hdf.view.ViewProperties.DataViewType

imageComplete(int) - Method in class hdf.view.ImageView.DefaultImageView.FlipFilter

imageComplete(int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

ImageConversionDialog - Class in hdf.view.dialog

ImageConversionDialog shows a message dialog requesting user input for converting files.

ImageConversionDialog(Shell, String, String, String, List<FileFormat>) - Constructor for class hdf.view.dialog.ImageConversionDialog

Constructs a FileConversionDialog

imageDataRange - Variable in class hdf.object.ScalarDS

The min-max range of image data values.

ImageView - Interface in hdf.view.ImageView

The image view interface for displaying image object

ImageViewFactory - Class in hdf.view.ImageView

ImageViewFactory() - Constructor for class hdf.view.ImageView.ImageViewFactory

importBinaryData() - Method in class hdf.view.TableView.DefaultBaseTableView

Import data values from binary file.

importTextData(String) - Method in class hdf.view.TableView.DefaultBaseTableView

Import data values from text file.

indexBase - Variable in class hdf.view.TableView.DefaultBaseTableView

INDEXBASE1 - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

indexBaseGroup - Variable in class hdf.view.TableView.DefaultBaseTableView

INFO - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

init() - Method in class hdf.object.Attribute

init() - Method in interface hdf.object.DataFormat

init() - Method in class hdf.object.fits.FitsDataset

init() - Method in class hdf.object.h4.H4Attribute

init() - Method in class hdf.object.h4.H4GRImage

init() - Method in class hdf.object.h4.H4SDS

Initializes the H4SDS such as dimension size of this dataset.

init() - Method in class hdf.object.h4.H4Vdata

Initializes the H4Vdata such as dimension sizes of this dataset.

init() - Method in class hdf.object.h5.H5Attribute

init() - Method in class hdf.object.h5.H5CompoundDS

Retrieves datatype and dataspace information from file and sets the dataset in memory.

init() - Method in class hdf.object.h5.H5ScalarDS

Retrieves datatype and dataspace information from file and sets the dataset in memory.

init() - Method in class hdf.object.nc2.NC2Attribute

init() - Method in class hdf.object.nc2.NC2Dataset

Retrieve and initialize dimensions and member information.

inited - Variable in class hdf.object.Dataset

Flag to indicate if this dataset has been initialized

initLibBounds() - Method in class hdf.object.FileFormat

Initialize the bounds of library versions

initLibBounds() - Method in class hdf.object.h5.H5File

Initialize the bounds of library versions

InputDialog - Class in hdf.view.dialog

Custom SWT dialog to allow the user to input strings for various uses.

InputDialog(Shell) - Constructor for class hdf.view.dialog.InputDialog

InputDialog(Shell, String, String) - Constructor for class hdf.view.dialog.InputDialog

InputDialog(Shell, String, String, int) - Constructor for class hdf.view.dialog.InputDialog

InputDialog(Shell, String, String, String) - Constructor for class hdf.view.dialog.InputDialog

InputDialog(Shell, String, String, String, int) - Constructor for class hdf.view.dialog.InputDialog

interlace - Variable in class hdf.object.ScalarDS

The interlace mode of the stored raster image data.

INTERLACE_LINE - Static variable in class hdf.object.ScalarDS

Indicates that each pixel component of RGB is stored as a scan line.

INTERLACE_PIXEL - Static variable in class hdf.object.ScalarDS

Indicates that the pixel RGB values are contiguous.

INTERLACE_PLANE - Static variable in class hdf.object.ScalarDS

Indicates that each pixel component of RGB is stored as a plane.

isApplyBitmaskOnly() - Method in class hdf.view.dialog.DataOptionDialog

isArray() - Method in class hdf.object.Datatype

Checks if this datatype is an array type.

isAutoContrast() - Static method in class hdf.view.ViewProperties

Returns true if auto contrast is used in image processing.

isBitField() - Method in class hdf.object.Datatype

Checks if this datatype is a bitfield type.

isCancelled() - Method in class hdf.view.dialog.DataOptionDialog

isChar() - Method in class hdf.object.Datatype

Checks if this datatype is a character type.

isCompound() - Method in class hdf.object.Datatype

Checks if this datatype is an compound type.

isContainerType - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

isConverted() - Method in class hdf.view.dialog.MathConversionDialog

isConvertEnum() - Static method in class hdf.view.ViewProperties

isDataLoaded - Variable in class hdf.object.Dataset

Flag to indicate if data values are loaded into memory.

isDataTransposed - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

isDataTransposed - Variable in class hdf.view.TableView.DefaultBaseTableView

isDefaultImageOrder - Variable in class hdf.object.ScalarDS

Flag to indicate if the dataset is displayed as an image with default order of dimensions.

isDefaultImageOrder() - Method in class hdf.object.ScalarDS

Returns true if this dataset is displayed as an image with default image order.

isDisplayTypeChar - Variable in class hdf.view.TableView.DefaultBaseTableView

isDisplayTypeChar() - Method in class hdf.view.dialog.DataOptionDialog

isEnum - Variable in class hdf.view.dialog.NewDataObjectDialog

isEnum() - Method in class hdf.object.Datatype

Checks if this datatype is a enum type.

isEnumConverted - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

isEnumConverted - Variable in class hdf.view.TableView.DefaultBaseTableView

isExtensionListInDescription() - Method in class hdf.view.DefaultFileFilter

isFileConverted() - Method in class hdf.view.dialog.ImageConversionDialog

isFillValueConverted - Variable in class hdf.object.ScalarDS

Flag to indicate if the FillValue is converted from unsigned C.

isFloat() - Method in class hdf.object.Datatype

Checks if this datatype is a floating-point type.

isFontChanged() - Method in class hdf.view.dialog.UserOptionsGeneralPage

isH4 - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

isH5 - Variable in class hdf.view.dialog.NewDataObjectDialog

isH5 - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

isHDF4(String) - Static method in class hdf.view.Tools

look at the first 4 bytes of the file to see if it is an HDF4 file.

isHDF5(String) - Static method in class hdf.view.Tools

look at the first 8 bytes of the file to see if it is an HDF5 file.

isImage - Variable in class hdf.object.ScalarDS

True if this dataset is an image.

isImage() - Method in class hdf.object.ScalarDS

Returns true if this dataset is an image.

isImageDisplay - Variable in class hdf.object.ScalarDS

Flag to indicate if the dataset is displayed as an image.

isImageDisplay() - Method in class hdf.object.ScalarDS

Returns true if this dataset is displayed as an image.

isImageDisplay() - Method in class hdf.view.dialog.DataOptionDialog

isIndexBase1() - Method in class hdf.view.dialog.DataOptionDialog

isIndexBase1() - Static method in class hdf.view.ViewProperties

isInited() - Method in interface hdf.object.DataFormat

isInited() - Method in class hdf.object.Dataset

isInteger() - Method in class hdf.object.Datatype

Checks if this datatype is an integer type.

isMemberSelected - Variable in class hdf.object.Attribute

The array to store flags to indicate if a member of this compound attribute is selected for read/write.

isMemberSelected - Variable in class hdf.object.CompoundDS

The array to store flags to indicate if a member of this compound dataset is selected for read/write.

isMemberSelected(int) - Method in class hdf.object.Attribute

Checks if a member of the compound attribute is selected for read/write.

isMemberSelected(int) - Method in interface hdf.object.CompoundDataFormat

Checks if a member of the compound data object is selected for read/write.

isMemberSelected(int) - Method in class hdf.object.CompoundDS

Checks if a member of the compound dataset is selected for read/write.

isN3 - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

isNamed - Variable in class hdf.object.Datatype

Determines whether this datatype is a named datatype

isNamed() - Method in class hdf.object.Datatype

Checks if this datatype is a named type.

isNaNINF(double) - Static method in class hdf.view.Tools

Check if a given number if NaN or INF.

isNaturalOrder - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

isNetcdf(String) - Static method in class hdf.view.Tools

look at the first 4 bytes of the file to see if it is a netCDF file byte[0]=67, byte[1]=68, byte[2]=70, byte[3]=1 or

isObjRef - Variable in class hdf.view.TableView.DefaultBaseTableView

isOpaque() - Method in class hdf.object.Datatype

Checks if this datatype is a opaque type.

isPaletteChanged - Variable in class hdf.view.PaletteView.DefaultPaletteView

isPlaneInterlace() - Method in class hdf.view.ImageView.DefaultImageView

isPlaneInterlace() - Method in interface hdf.view.ImageView.ImageView

isReadOnly - Variable in class hdf.object.FileFormat

Flag indicating if the file access is read-only.

isReadOnly - Variable in class hdf.view.TableView.DefaultBaseTableView

isReadOnly() - Method in class hdf.object.FileFormat

Returns true if the file access is read-only.

isReadOnly() - Static method in class hdf.view.ViewProperties

Returns true if default file access is read only.

isRef() - Method in class hdf.object.Datatype

Checks if this datatype is a reference type.

isReference() - Method in class hdf.object.h5.H5Datatype

isRefObj() - Method in class hdf.object.h5.H5Datatype

isRegRef - Variable in class hdf.view.TableView.DefaultBaseTableView

isRegRef() - Method in class hdf.object.h5.H5Datatype

isRoot() - Method in class hdf.object.Group

Checks if it is a root group.

isScalar - Variable in class hdf.object.Attribute

Flag to indicate if the attribute data is a single scalar point

isScalar() - Method in class hdf.object.Attribute

isString() - Method in class hdf.object.Datatype

Checks if this datatype is a string type.

isString(long) - Method in class hdf.object.Dataset

Checks if a given datatype is a string.

isString(long) - Method in class hdf.object.h5.H5CompoundDS

isText - Variable in class hdf.object.ScalarDS

True if this dataset is ASCII text.

isText() - Method in class hdf.object.Datatype

isText() - Method in class hdf.object.fits.FitsDatatype

isText() - Method in class hdf.object.h4.H4Datatype

isText() - Method in class hdf.object.h5.H5Datatype

isText() - Method in class hdf.object.nc2.NC2Datatype

isThisType(FileFormat) - Method in class hdf.object.FileFormat

Checks if the class implements the specified FileFormat.

isThisType(FileFormat) - Method in class hdf.object.fits.FitsFile

Checks if the given file format is a Fits file.

isThisType(FileFormat) - Method in class hdf.object.h4.H4File

Checks if the given file format is an HDF4 file.

isThisType(FileFormat) - Method in class hdf.object.h5.H5File

Checks if the specified FileFormat instance has the HDF5 format.

isThisType(FileFormat) - Method in class hdf.object.nc2.NC2File

Checks if the given file format is a NetCDF3 file.

isThisType(String) - Method in class hdf.object.FileFormat

Checks if the implementing FileFormat class matches the format of the specified file.

isThisType(String) - Method in class hdf.object.fits.FitsFile

Checks if a given file is a Fits file.

isThisType(String) - Method in class hdf.object.h4.H4File

Checks if the given file is an HDF4 file or netCDF.

isThisType(String) - Method in class hdf.object.h5.H5File

Checks if the specified file has the HDF5 format.

isThisType(String) - Method in class hdf.object.nc2.NC2File

Checks if the given file is a NetCDF file.

isTransposed() - Method in class hdf.view.dialog.DataOptionDialog

isTrueColor - Variable in class hdf.object.ScalarDS

True if this dataset is a true color image.

isTrueColor() - Method in class hdf.object.ScalarDS

isTrueColor() - Method in class hdf.view.ImageView.DefaultImageView

isTrueColor() - Method in interface hdf.view.ImageView.ImageView

isUnsigned() - Method in class hdf.object.Datatype

Checks if this datatype is unsigned.

isUnsigned() - Method in class hdf.object.fits.FitsDatatype

isUnsigned() - Method in class hdf.object.h4.H4Datatype

isUnsigned() - Method in class hdf.object.nc2.NC2Datatype

isUnsigned(long) - Static method in class hdf.object.h4.H4Datatype

Checks if the datatype is an unsigned integer.

isUnsigned(long) - Static method in class hdf.object.h5.H5Datatype

Checks if a datatype specified by the identifier is an unsigned integer.

isUserGuideChanged() - Method in class hdf.view.dialog.UserOptionsGeneralPage

isValueChanged - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

isVariableStr - Variable in class hdf.object.Datatype

isVarStr() - Method in class hdf.object.Datatype

Checks if this datatype is a variable-length string type.

isVirtual() - Method in class hdf.object.Dataset

isVirtual() - Method in class hdf.object.h5.H5CompoundDS

isVirtual() - Method in class hdf.object.h5.H5ScalarDS

isVLen - Variable in class hdf.view.dialog.NewDataObjectDialog

isVLEN - Variable in class hdf.object.Datatype

Determines whether this datatype is a variable-length type.

isVLEN() - Method in class hdf.object.Datatype

Checks if this datatype is a variable-length type.

isVlenStr - Variable in class hdf.view.dialog.NewDataObjectDialog

isWorkDirChanged() - Method in class hdf.view.dialog.UserOptionsGeneralPage

itransform(double, double, double[]) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

L

launchBrowser(String) - Static method in class hdf.view.Tools

Launch default browser for a given URL.

lengthField - Variable in class hdf.view.dialog.NewDataObjectDialog

TextField for entering the length of the data array or string.

LIBVER_EARLIEST - Static variable in class hdf.object.h5.H5File

LIBVER_LATEST - Static variable in class hdf.object.h5.H5File

LIBVER_V110 - Static variable in class hdf.object.h5.H5File

LIBVER_V18 - Static variable in class hdf.object.h5.H5File

LINE_COLORS - Static variable in class hdf.view.Chart

The default colors of lines for selected columns

LINEPLOT - Static variable in class hdf.view.Chart

line style chart

LINK_TYPE_EXTERNAL - Static variable in class hdf.object.Group

LINK_TYPE_HARD - Static variable in class hdf.object.Group

LINK_TYPE_SOFT - Static variable in class hdf.object.Group

linkTargetObjName - Variable in class hdf.object.HObject

The name of the Target Object that is being linked to.

load() - Method in class hdf.view.dialog.UserOptionsGeneralPage

Loads all stored values in the FieldEditors.

load() - Method in class hdf.view.dialog.UserOptionsHDFPage

Loads all stored values in the FieldEditors.

load() - Method in class hdf.view.dialog.UserOptionsViewModulesPage

Loads all stored values in the FieldEditors.

load() - Method in class hdf.view.ViewProperties

Load user properties from property file

loadData(DataFormat) - Method in class hdf.view.TableView.DefaultBaseTableView

loadData(DataFormat) - Method in class hdf.view.TableView.DefaultCompoundDSTableView

loadData(DataFormat) - Method in class hdf.view.TableView.DefaultScalarDSTableView

loadExtClass() - Static method in class hdf.view.ViewProperties

load module classes

loadIcons() - Static method in class hdf.view.ViewProperties

log - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

log - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

log - Variable in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator

M

main(String[]) - Static method in class hdf.view.HDFView

The starting point of this application.

MathConversionDialog - Class in hdf.view.dialog

MathConversionDialog shows a message dialog requesting user input for math conversion.

MathConversionDialog(Shell, Object) - Constructor for class hdf.view.dialog.MathConversionDialog

Constructs MathConversionDialog.

MAX_INT16 - Static variable in class hdf.view.Tools

MAX_INT32 - Static variable in class hdf.view.Tools

MAX_INT64 - Static variable in class hdf.view.Tools

MAX_INT8 - Static variable in class hdf.view.Tools

MAX_RECENT_FILES - Static variable in class hdf.view.ViewProperties

the maximum number of most recent files

MAX_UINT16 - Static variable in class hdf.view.Tools

MAX_UINT32 - Static variable in class hdf.view.Tools

MAX_UINT64 - Static variable in class hdf.view.Tools

MAX_UINT8 - Static variable in class hdf.view.Tools

maxDims - Variable in class hdf.object.Dataset

The max dimension sizes of the dataset

memberDims - Variable in class hdf.object.Attribute

The dimension sizes of each member.

memberDims - Variable in class hdf.object.CompoundDS

The dimension sizes of each member.

memberNames - Variable in class hdf.object.Attribute

The names of the members of the compound attribute.

memberNames - Variable in class hdf.object.CompoundDS

The names of members of the compound dataset.

memberOrders - Variable in class hdf.object.Attribute

Array containing the total number of elements of the members of this compound attribute.

memberOrders - Variable in class hdf.object.CompoundDS

Returns array containing the total number of elements of the members of this compound dataset.

memberTypes - Variable in class hdf.object.Attribute

The datatypes of the compound attribute's members.

memberTypes - Variable in class hdf.object.CompoundDS

The datatypes of compound members.

METADATA - Enum constant in enum class hdf.view.ViewProperties.DataViewType

MetaDataContainer - Interface in hdf.object

An interface that provides general I/O operations for object metadata attached to an object.

MetaDataView - Interface in hdf.view.MetaDataView

The metadata view interface for displaying metadata information

MetaDataViewFactory - Class in hdf.view.MetaDataView

MetaDataViewFactory() - Constructor for class hdf.view.MetaDataView.MetaDataViewFactory

N

namedChoice - Variable in class hdf.view.dialog.NewDataObjectDialog

The Choice of the datatypes

namedList - Variable in class hdf.view.dialog.NewDataObjectDialog

nameField - Variable in class hdf.view.dialog.NewDatasetDialog

TextField for entering the name of the object

nameField - Variable in class hdf.view.dialog.NewDatatypeDialog

TextField for entering the name of the object

NATIVE - Static variable in class hdf.object.Datatype

The default definition for datatype size, order, and sign.

nativeType - Variable in class hdf.object.nc2.NC2Datatype

NC2Attribute - Class in hdf.object.nc2

An attribute is a (name, value) pair of metadata attached to a primary data object such as a dataset, group or named datatype.

NC2Attribute(HObject, String, Datatype, long[]) - Constructor for class hdf.object.nc2.NC2Attribute

Create an attribute with specified name, data type and dimension sizes.

NC2Attribute(HObject, String, Datatype, long[], Object) - Constructor for class hdf.object.nc2.NC2Attribute

Create an attribute with specific name and value.

NC2Dataset - Class in hdf.object.nc2

NC2Dataset describes an multi-dimension array of HDF5 scalar or atomic data types, such as byte, int, short, long, float, double and string, and operations performed on the scalar dataset

NC2Dataset(FileFormat, Variable, long[]) - Constructor for class hdf.object.nc2.NC2Dataset

Constructs an NC2Dataset object with specific netcdf variable.

NC2Datatype - Class in hdf.object.nc2

Datatype encapsulates information of a datatype.

NC2Datatype(int, int, int, int) - Constructor for class hdf.object.nc2.NC2Datatype

Create an Datatype with specified class, size, byte order and sign.

NC2Datatype(DataType) - Constructor for class hdf.object.nc2.NC2Datatype

Constructs a NC2Datatype with a given NetCDF3 native datatype object.

NC2File - Class in hdf.object.nc2

This class provides file level APIs.

NC2File() - Constructor for class hdf.object.nc2.NC2File

Constructs an empty NC2File with read-only access.

NC2File(String) - Constructor for class hdf.object.nc2.NC2File

Creates an NC2File object of given file name with read-only access.

NC2Group - Class in hdf.object.nc2

An NC2Group represents NetCDF3 group, inheriting from Group.

NC2Group(FileFormat, String, String, Group, long[]) - Constructor for class hdf.object.nc2.NC2Group

Constructs an NC2 group with specific name, path, and parent.

netcdfAttributeString(int) - Method in class hdf.object.nc2.NC2Group

netcdfDimensionString(int) - Method in class hdf.object.nc2.NC2Group

netCDFGroup - Variable in class hdf.object.nc2.NC2Group

The corresponding netcdf Group for this group.

netcdfTypedefString(int) - Method in class hdf.object.nc2.NC2Group

NewAttributeDialog - Class in hdf.view.dialog

NewAttributeDialog displays components for adding a new attribute.

NewAttributeDialog(Shell, HObject, List<HObject>) - Constructor for class hdf.view.dialog.NewAttributeDialog

Constructs a NewAttributeDialog with specified object (dataset, group, or image) for the new attribute to be attached to.

NewCompoundDatasetDialog - Class in hdf.view.dialog

NewCompoundDatasetDialog shows a message dialog requesting user input for creating a new HDF4/5 compound dataset.

NewCompoundDatasetDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewCompoundDatasetDialog

Constructs a NewDatasetDialog with specified list of possible parent groups.

NewDataObjectDialog - Class in hdf.view.dialog

NewDataDialog is an intermediate class for creating data types.

NewDataObjectDialog(Shell, HObject, List<?>) - Constructor for class hdf.view.dialog.NewDataObjectDialog

NewDatasetDialog - Class in hdf.view.dialog

NewDatasetDialog shows a message dialog requesting user input for creating a new HDF4/5 dataset.

NewDatasetDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewDatasetDialog

Constructs a NewDatasetDialog with specified list of possible parent groups.

NewDatasetDialog(Shell, Group, List<?>, DataView) - Constructor for class hdf.view.dialog.NewDatasetDialog

Constructs a NewDatasetDialog with specified list of possible parent groups.

NewDatatypeDialog - Class in hdf.view.dialog

NewDatatypeDialog shows a message dialog requesting user input for creating a new HDF5 datatype.

NewDatatypeDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewDatatypeDialog

Constructs a NewDatatypeDialog with specified list of possible parent groups.

NewGroupDialog - Class in hdf.view.dialog

NewGroupDialog shows a message dialog requesting user input for creating a new HDF4/5 group.

NewGroupDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewGroupDialog

Constructs a NewGroupDialog with specified list of possible parent groups.

NewImageDialog - Class in hdf.view.dialog

NewImageDialog shows a message dialog requesting user input for creating a new HDF4/5 Image.

NewImageDialog(Shell, Group, List<?>) - Constructor for class hdf.view.dialog.NewImageDialog

Constructs a NewImageDialog with specified list of possible parent groups.

newInstance(Class<?>, Object[]) - Static method in class hdf.view.Tools

Create and initialize a new instance of the given class.

NewLinkDialog - Class in hdf.view.dialog

NewLinkDialog shows a message dialog requesting user input for creating new links.

NewLinkDialog(Shell, Group, List<?>, List<FileFormat>) - Constructor for class hdf.view.dialog.NewLinkDialog

Constructs a NewLinkDialog with specified list of possible parent groups.

newObject - Variable in class hdf.view.dialog.NewDataObjectDialog

the object created

NewshowObjRefData(long) - Method in class hdf.view.TableView.DefaultBaseTableView

Display data pointed to by object references.

NewshowRegRefData(String) - Method in class hdf.view.TableView.DefaultBaseTableView

Display data pointed to by region references.

nMembersInFile - Variable in class hdf.object.Group

Total number of members of this group in file.

normalFormat - Variable in class hdf.view.TableView.DefaultBaseTableView

nPoints - Variable in class hdf.object.Dataset

The number of data points in the memory buffer.

NSGN - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

nullStr - Static variable in class hdf.view.TableView.DataFactoryUtils

numberFormat - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

numberFormat - Variable in class hdf.view.TableView.DefaultBaseTableView

numberOfMembers - Variable in class hdf.object.Attribute

The number of members of the compound attribute.

numberOfMembers - Variable in class hdf.object.CompoundDS

The number of members of the compound dataset.

numberOfPoints - Variable in class hdf.view.Chart

number of data points

O

OBJECT - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

objList - Variable in class hdf.view.dialog.NewDataObjectDialog

oid - Variable in class hdf.object.HObject

Array of long integer storing unique identifier for the object.

open() - Method in class hdf.object.Attribute

open() - Method in class hdf.object.Datatype

Opens access to this named datatype.

open() - Method in class hdf.object.FileFormat

Opens file and returns a file identifier.

open() - Method in class hdf.object.fits.FitsDataset

open() - Method in class hdf.object.fits.FitsFile

open() - Method in class hdf.object.fits.FitsGroup

open() - Method in class hdf.object.h4.H4Attribute

open() - Method in class hdf.object.h4.H4File

open() - Method in class hdf.object.h4.H4GRImage

open() - Method in class hdf.object.h4.H4Group

open() - Method in class hdf.object.h4.H4SDS

open() - Method in class hdf.object.h4.H4Vdata

open() - Method in class hdf.object.h5.H5Attribute

open() - Method in class hdf.object.h5.H5CompoundDS

open() - Method in class hdf.object.h5.H5Datatype

Opens access to a named datatype.

open() - Method in class hdf.object.h5.H5File

Opens file and returns a file identifier.

open() - Method in class hdf.object.h5.H5Group

open() - Method in class hdf.object.h5.H5Link

open() - Method in class hdf.object.h5.H5ScalarDS

open() - Method in class hdf.object.HObject

Opens an existing object such as a dataset or group for access.

open() - Method in class hdf.object.nc2.NC2Attribute

open() - Method in class hdf.object.nc2.NC2Dataset

open() - Method in class hdf.object.nc2.NC2File

open() - Method in class hdf.object.nc2.NC2Group

open() - Method in class hdf.view.Chart

open() - Method in class hdf.view.dialog.DataOptionDialog

open() - Method in class hdf.view.dialog.ImageConversionDialog

open() - Method in class hdf.view.dialog.InputDialog

Opens the InputDialog and returns the user's input when the dialog closes.

open() - Method in class hdf.view.dialog.MathConversionDialog

open() - Method in class hdf.view.dialog.NewAttributeDialog

open() - Method in class hdf.view.dialog.NewCompoundDatasetDialog

open() - Method in class hdf.view.dialog.NewDatasetDialog

open() - Method in class hdf.view.dialog.NewDatatypeDialog

open() - Method in class hdf.view.dialog.NewGroupDialog

open() - Method in class hdf.view.dialog.NewImageDialog

open() - Method in class hdf.view.dialog.NewLinkDialog

open(int...) - Method in class hdf.object.FileFormat

Opens file and returns a file identifier.

open(int...) - Method in class hdf.object.h5.H5File

Opens file and returns a file identifier.

open(long) - Method in class hdf.object.h5.H5File

Opens a file with specific file access property list.

open(String, int) - Method in class hdf.object.FileFormat

Deprecated.

As of 2.4, replaced by FileFormat.createInstance(String, int) The replacement method has identical functionality and a more descriptive name. Since open is used elsewhere to perform a different function this method has been deprecated.

OPEN_NEW - Static variable in class hdf.object.FileFormat

File first time access flag for open file.

openFile(String, int) - Method in class hdf.view.TreeView.DefaultTreeView

Opens a file and retrieves the file structure of the file.

openFile(String, int) - Method in interface hdf.view.TreeView.TreeView

Opens a file and retrieves the file structure of the file.

openMainWindow(List<File>, int, int, int, int) - Method in class hdf.view.HDFView

Creates HDFView with a given size, and opens the given files in the viewer.

ORDER_BE - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

ORDER_LE - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

ORDER_NONE - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

ORDER_VAX - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

org.hdfgroup.hdfview - module org.hdfgroup.hdfview

org.hdfgroup.object - module org.hdfgroup.object

ORIGIN_LL - Static variable in class hdf.view.ViewProperties

image origin: LowerLeft

ORIGIN_LR - Static variable in class hdf.view.ViewProperties

image origin: LowerRight

ORIGIN_UL - Static variable in class hdf.view.ViewProperties

image origin: UpperLeft

ORIGIN_UR - Static variable in class hdf.view.ViewProperties

image origin: UpperRight

originalBuf - Variable in class hdf.object.Dataset

The data buffer that contains the raw data directly reading from file (before any data conversion).

originalFormatClass - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

P

palette - Variable in class hdf.object.ScalarDS

The indexed RGB color model with 256 colors.

palette - Variable in class hdf.view.PaletteView.DefaultPaletteView

PALETTE - Enum constant in enum class hdf.view.ViewProperties.DataViewType

PaletteView - Interface in hdf.view.PaletteView

The palette view interface for displaying image palette

PaletteViewFactory - Class in hdf.view.PaletteView

PaletteViewFactory() - Constructor for class hdf.view.PaletteView.PaletteViewFactory

parent - Variable in class hdf.object.Group

The parent group where this group is located.

parentObj - Variable in class hdf.view.dialog.NewDataObjectDialog

the object which the this object is attached

parentObject - Variable in class hdf.object.Attribute

The HObject to which this Attribute is attached

performDefaults() - Method in class hdf.view.dialog.UserOptionsGeneralPage

Performs special processing when this page's Defaults button has been pressed.

performDefaults() - Method in class hdf.view.dialog.UserOptionsHDFPage

Performs special processing when this page's Defaults button has been pressed.

performDefaults() - Method in class hdf.view.dialog.UserOptionsViewModulesPage

Performs special processing when this page's Defaults button has been pressed.

performOk() - Method in class hdf.view.dialog.UserOptionsGeneralPage

Notifies that the OK button of this page's container has been pressed.

performOk() - Method in class hdf.view.dialog.UserOptionsHDFPage

Notifies that the OK button if this page's container has been pressed.

performOk() - Method in class hdf.view.dialog.UserOptionsViewModulesPage

Notifies that the OK button of this page's container has been pressed.

physicalLocationToBufIndex(int, int) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

R

rank - Variable in class hdf.object.Dataset

The number of dimensions of the dataset.

rank - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

read() - Method in class hdf.object.Attribute

read() - Method in interface hdf.object.DataFormat

Reads the data from file.

read() - Method in class hdf.object.fits.FitsDataset

read() - Method in class hdf.object.h4.H4GRImage

read() - Method in class hdf.object.h4.H4SDS

read() - Method in class hdf.object.h4.H4Vdata

read() - Method in class hdf.object.h5.H5CompoundDS

read() - Method in class hdf.object.h5.H5ScalarDS

Reads the data from file.

read() - Method in class hdf.object.nc2.NC2Dataset

READ - Enum constant in enum class hdf.object.h5.H5CompoundDS.IO_TYPE

READ - Enum constant in enum class hdf.object.h5.H5ScalarDS.IO_TYPE

READ - Static variable in class hdf.object.FileFormat

File access flag for read-only permission.

readBytes() - Method in class hdf.object.Attribute

readBytes() - Method in class hdf.object.Dataset

Reads the raw data of the dataset from file to a byte array.

readBytes() - Method in class hdf.object.fits.FitsDataset

readBytes() - Method in class hdf.object.h4.H4GRImage

readBytes() - Method in class hdf.object.h4.H4SDS

readBytes() - Method in class hdf.object.h4.H4Vdata

readBytes() - Method in class hdf.object.h5.H5CompoundDS

readBytes() - Method in class hdf.object.h5.H5ScalarDS

readBytes() - Method in class hdf.object.nc2.NC2Dataset

READONLY - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

readPalette(int) - Method in class hdf.object.fits.FitsDataset

readPalette(int) - Method in class hdf.object.h4.H4GRImage

readPalette(int) - Method in class hdf.object.h4.H4SDS

readPalette(int) - Method in class hdf.object.h5.H5ScalarDS

readPalette(int) - Method in class hdf.object.nc2.NC2Dataset

read specific image palette from file.

readPalette(int) - Method in class hdf.object.ScalarDS

Reads a specific image palette from file.

readPalette(String) - Static method in class hdf.view.Tools

read an image palette from a file.

RefContextMenu(NatTable) - Constructor for class hdf.view.TableView.DefaultBaseTableView.RefContextMenu

refObject - Variable in class hdf.view.dialog.NewDataObjectDialog

the object referenced

reloadTree(Group) - Method in class hdf.object.h5.H5File

reload the sub-tree structure from file.

removeDataView(DataView) - Method in interface hdf.view.DataView.DataViewManager

Data content is closed, remove the dataview from the main window

removeDataView(DataView) - Method in class hdf.view.HDFView

removeFileFormat(String) - Static method in class hdf.object.FileFormat

Removes a FileFormat from the list of supported formats.

removeFromMemberList(HObject) - Method in class hdf.object.Group

Removes an object from the member list of this group in memory.

removeMetadata(Object) - Method in class hdf.object.Attribute

removeMetadata(Object) - Method in class hdf.object.Datatype

removeMetadata(Object) - Method in class hdf.object.fits.FitsDataset

removeMetadata(Object) - Method in class hdf.object.fits.FitsGroup

Deletes an attribute from this dataset.

removeMetadata(Object) - Method in class hdf.object.h4.H4GRImage

removeMetadata(Object) - Method in class hdf.object.h4.H4Group

removeMetadata(Object) - Method in class hdf.object.h4.H4SDS

removeMetadata(Object) - Method in class hdf.object.h4.H4Vdata

removeMetadata(Object) - Method in class hdf.object.h5.H5CompoundDS

removeMetadata(Object) - Method in class hdf.object.h5.H5Datatype

removeMetadata(Object) - Method in class hdf.object.h5.H5Group

removeMetadata(Object) - Method in class hdf.object.h5.H5Link

removeMetadata(Object) - Method in class hdf.object.h5.H5ScalarDS

removeMetadata(Object) - Method in interface hdf.object.MetaDataContainer

Deletes an existing piece of metadata from this object.

removeMetadata(Object) - Method in class hdf.object.nc2.NC2Dataset

removeMetadata(Object) - Method in class hdf.object.nc2.NC2Group

Deletes an attribute from this dataset.

renameAttribute(HObject, String, String) - Method in class hdf.object.FileFormat

Renames an attribute.

renameAttribute(HObject, String, String) - Method in class hdf.object.h5.H5File

Renames an attribute.

renameObject(HObject, String) - Static method in class hdf.object.h5.H5File

Rename the given object

renameObject(HObject, String, String) - Static method in class hdf.object.h5.H5File

Rename the given object

reopenFile(FileFormat, int) - Method in class hdf.view.TreeView.DefaultTreeView

reopenFile(FileFormat, int) - Method in interface hdf.view.TreeView.TreeView

resetSelection() - Method in class hdf.object.Attribute

rootDir - Variable in class hdf.view.dialog.UserOptionsDefaultPage

rootDir - Variable in class hdf.view.dialog.UserOptionsDialog

ROTATE_CCW_90 - Static variable in class hdf.view.ImageView.DefaultImageView

ROTATE IMAGE COUNTER CLOCKWISE 90 DEGREE.

ROTATE_CW_90 - Static variable in class hdf.view.ImageView.DefaultImageView

ROTATE IMAGE 90 DEGREE CLOCKWISE.

Rotate90Filter(int) - Constructor for class hdf.view.ImageView.DefaultImageView.Rotate90Filter

rowCount - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

RowHeader(IUniqueIndexLayer, ILayer, SelectionLayer) - Constructor for class hdf.view.TableView.DefaultBaseTableView.RowHeader

rowHeaderDataProvider - Variable in class hdf.view.TableView.DefaultBaseTableView

RowHeaderDataProvider(DataFormat) - Constructor for class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider

runMainWindow() - Method in class hdf.view.HDFView

S

save() - Method in class hdf.view.ViewProperties

Save user properties into property file

saveAsBinary() - Method in class hdf.view.TableView.DefaultBaseTableView

Save data as binary.

saveAsBinary(DataOutputStream, Object, ByteOrder) - Static method in class hdf.view.Tools

saveAsText() - Method in class hdf.view.TableView.DefaultBaseTableView

Save data as text.

saveFile(FileFormat) - Method in class hdf.view.TreeView.DefaultTreeView

Save a file

saveFile(FileFormat) - Method in interface hdf.view.TreeView.TreeView

save a file

saveImageAs(BufferedImage, File, String) - Static method in class hdf.view.Tools

Save a BufferedImage into an image file.

ScalarDS - Class in hdf.object

A scalar dataset is a multiple dimension array of scalar points.

ScalarDS(FileFormat, String, String) - Constructor for class hdf.object.ScalarDS

Constructs an instance of a ScalarDS with specific name and path.

ScalarDS(FileFormat, String, String, long[]) - Constructor for class hdf.object.ScalarDS

Deprecated.

Not for public use in the future.
Using ScalarDS(FileFormat, String, String)

scientificFormat - Variable in class hdf.view.TableView.DefaultBaseTableView

selectedDims - Variable in class hdf.object.Dataset

Array that contains the number of data points selected (for read/write) in each dimension.

selectedIndex - Variable in class hdf.object.Dataset

Array that contains the indices of the dimensions selected for display.

selectedStride - Variable in class hdf.object.Dataset

The number of elements to move from the start location in each dimension.

selectHyperslab(long, long[], long[], long[], long[], long[]) - Static method in class hdf.object.h5.H5Utils

Set up a hyperslab selection within a dataset.

selectionLayer - Variable in class hdf.view.TableView.DefaultBaseTableView

selectMember(int) - Method in class hdf.object.Attribute

Selects the i-th member for read/write.

selectMember(int) - Method in interface hdf.object.CompoundDataFormat

Selects the i-th member for read/write.

selectMember(int) - Method in class hdf.object.CompoundDS

Selects the i-th member for read/write.

SEPARATOR - Static variable in class hdf.object.CompoundDS

A single character to separate the names of nested compound fields.

SEPARATOR - Static variable in class hdf.object.HObject

The separator of object path, i.e.

setAllMemberSelection(boolean) - Method in class hdf.object.Attribute

Selects/deselects all members.

setAllMemberSelection(boolean) - Method in interface hdf.object.CompoundDataFormat

Selects/deselects all members.

setAllMemberSelection(boolean) - Method in class hdf.object.CompoundDS

Selects/deselects all members.

setAutoContrast(boolean) - Static method in class hdf.view.ViewProperties

Set the flag to indicate if auto contrast is used in image process.

setColorModel(ColorModel) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

setConvertByteToString(boolean) - Method in class hdf.object.Dataset

Sets the flag that indicates if a byte array is converted to a string array.

setConvertEnum(boolean) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

setConvertEnum(boolean) - Static method in class hdf.view.ViewProperties

setData(Object) - Method in interface hdf.object.DataFormat

setData(Object) - Method in class hdf.object.Dataset

Not for public use in the future.

setDataDelimiter(String) - Static method in class hdf.view.ViewProperties

set the delimiter of data values

setDataValue(int, int, Object) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

setDataValue(int, int, Object) - Method in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider

setDataValue(int, int, Object, Object) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

setDataValue(int, Object, Object) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

setDefaultDisplayMode(boolean) - Method in class hdf.view.TreeView.DefaultTreeView

change the display option.

setDefaultDisplayMode(boolean) - Method in interface hdf.view.TreeView.TreeView

change the display option.

setDescription(String) - Method in class hdf.view.DefaultFileFilter

Sets the human readable description of this filter.

setDimensions(int, int) - Method in class hdf.view.ImageView.DefaultImageView.FlipFilter

setDimensions(int, int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

setEarlyLib(String) - Static method in class hdf.view.ViewProperties

Set the value of default lib version for the earliest.

setEnumMembers(String) - Method in class hdf.object.Datatype

Sets the (key, value) pairs of enum members for enum datatype.

setExtensionListInDescription(boolean) - Method in class hdf.view.DefaultFileFilter

Determines whether the extension list (.jpg, .gif, etc) should show up in the human readable description.

setFileExtension(String) - Static method in class hdf.view.ViewProperties

set the file extension

setFontSize(int) - Static method in class hdf.view.ViewProperties

sets the font size

setFontType(String) - Static method in class hdf.view.ViewProperties

sets the font type

setFullname(String, String) - Method in class hdf.object.h5.H5Datatype

setFullname(String, String) - Method in class hdf.object.HObject

setH4toH5(String) - Static method in class hdf.view.ViewProperties

set the path of the H4 to H5 converter

setHDF5UserBlock(String, String, byte[]) - Static method in class hdf.view.Tools

Write HDF5 user block data into byte array.

setHints(int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

setImage(Image) - Method in class hdf.view.ImageView.DefaultImageView

setImage(Image) - Method in interface hdf.view.ImageView.ImageView

Sets the image

setImageDataRange(double, double) - Method in class hdf.object.ScalarDS

Sets data range for an image.

setImageOrigin(String) - Static method in class hdf.view.ViewProperties

set the image origin

setIndexBase1(boolean) - Static method in class hdf.view.ViewProperties

Set the flag to indicate if IndexBase should start at 1.

setIndexOrder(int) - Method in class hdf.object.FileFormat

setIndexOrder(int) - Method in class hdf.object.h4.H4File

setIndexOrder(int) - Method in class hdf.object.h5.H5File

setIndexOrder(String) - Static method in class hdf.view.ViewProperties

set the index order

setIndexType(int) - Method in class hdf.object.FileFormat

setIndexType(int) - Method in class hdf.object.h4.H4File

setIndexType(int) - Method in class hdf.object.h5.H5File

setIndexType(String) - Static method in class hdf.view.ViewProperties

set the index type

setIsImage(boolean) - Method in class hdf.object.ScalarDS

Sets the flag to indicate this dataset is an image.

setIsImageDisplay(boolean) - Method in class hdf.object.ScalarDS

Sets the flag to display the dataset as an image.

setIsValueChanged(boolean) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

setLateLib(String) - Static method in class hdf.view.ViewProperties

Set the value of default lib version for the latest.

setLibBounds(String, String) - Method in class hdf.object.FileFormat

Sets the bounds of library versions.

setLibBounds(String, String) - Method in class hdf.object.h5.H5File

Sets the bounds of library versions.

setLineColors(int[]) - Method in class hdf.view.Chart

Sets the color of each line of a line plot

setLineLabels(String[]) - Method in class hdf.view.Chart

Sets the labels of each line.

setLinkTargetObjName(String) - Method in class hdf.object.HObject

Sets the name of the target object that is linked to.

setMaxMembers(int) - Method in class hdf.object.FileFormat

Sets the maximum number of objects to be loaded into memory.

setMaxMembers(int) - Static method in class hdf.view.ViewProperties

Current Java applications such as HDFView cannot handle files with large number of objects such as 1,000,000 objects.

setName(String) - Method in class hdf.object.fits.FitsDataset

setName(String) - Method in class hdf.object.Group

Sets the name of the group.

setName(String) - Method in class hdf.object.h5.H5CompoundDS

setName(String) - Method in class hdf.object.h5.H5Datatype

setName(String) - Method in class hdf.object.h5.H5Group

setName(String) - Method in class hdf.object.h5.H5Link

setName(String) - Method in class hdf.object.h5.H5ScalarDS

setName(String) - Method in class hdf.object.HObject

Sets the name of the object.

setName(String) - Method in class hdf.object.nc2.NC2Dataset

Sets the name of the data object.

setNetCDFGroup(Group) - Method in class hdf.object.nc2.NC2Group

setNewLibBounds(String, String) - Method in class hdf.object.FileFormat

Sets the bounds of new library versions.

setNewLibBounds(String, String) - Method in class hdf.object.h4.H4File

setNewLibBounds(String, String) - Method in class hdf.object.h5.H5File

Sets the bounds of new library versions.

setNumberFormat(NumberFormat) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

setPalette(byte[][]) - Method in class hdf.object.ScalarDS

Sets the palette for this dataset.

setPalette(byte[][]) - Method in class hdf.view.ImageView.DefaultImageView

setPalette(byte[][]) - Method in interface hdf.view.ImageView.ImageView

Sets the image palette

setParentObject(HObject) - Method in class hdf.object.Attribute

Sets the HObject to which this Attribute is "attached".

setPath(String) - Method in class hdf.object.h5.H5Group

setPath(String) - Method in class hdf.object.HObject

Sets the path of the object.

setPixels(int, int, int, int, ColorModel, byte[], int, int) - Method in class hdf.view.ImageView.DefaultImageView.FlipFilter

setPixels(int, int, int, int, ColorModel, byte[], int, int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

setPixels(int, int, int, int, ColorModel, int[], int, int) - Method in class hdf.view.ImageView.DefaultImageView.FlipFilter

setPixels(int, int, int, int, ColorModel, int[], int, int) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

setProperties(Hashtable) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

setProperty(String, Object) - Method in class hdf.object.Attribute

set a property for the attribute.

setReadOnly(boolean) - Static method in class hdf.view.ViewProperties

Set the flag to indicate if default file access is read only.

setRecentFiles(ArrayList<String>) - Static method in class hdf.view.ViewProperties

Sets the list of most recently accessed files.

setRootDir(String) - Static method in class hdf.view.ViewProperties

set the path of the default root directory

setShowAsBin(boolean) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

setShowAsHex(boolean) - Method in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

setShowImageValue(boolean) - Static method in class hdf.view.ViewProperties

Set the flag to indicate if "show image values" is set.

setShowRegRefValue(boolean) - Static method in class hdf.view.ViewProperties

Set the flag to indicate if "show RegRef values" is set.

setStartMembers(int) - Method in class hdf.object.FileFormat

Sets the starting index of objects to be loaded into memory.

setStartMembers(int) - Static method in class hdf.view.ViewProperties

Current Java applications such as HDFView cannot handle files with large number of objects such as 1,000,000 objects.

setTestState(boolean) - Method in class hdf.view.HDFView

Set the testing state that determines if HDFView is being executed for GUI testing.

setTypeToInteger() - Method in class hdf.view.Chart

Sets the data type of the plot data to be integer.

setUsersGuide(String) - Static method in class hdf.view.ViewProperties

set the path of H5View User's guide

setWorkDir(String) - Static method in class hdf.view.ViewProperties

set the path of the default work directory

shell - Variable in class hdf.view.dialog.NewDataObjectDialog

shell - Variable in class hdf.view.dialog.UserOptionsDefaultPage

shell - Variable in class hdf.view.TableView.DefaultBaseTableView

show() - Method in interface hdf.view.HelpView.HelpView

Display help information

showAsBin - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

showAsBin - Variable in class hdf.view.TableView.DefaultBaseTableView

showAsHex - Variable in class hdf.view.TableView.DataDisplayConverterFactory.HDFDisplayConverter

showAsHex - Variable in class hdf.view.TableView.DefaultBaseTableView

showConfirm(Shell, String, String) - Static method in class hdf.view.Tools

Show an SWT Confirm dialog with the given message.

showDataContent(HObject) - Method in class hdf.view.TreeView.DefaultTreeView

Display the content of a data object.

showDataContent(HObject) - Method in interface hdf.view.TreeView.TreeView

Display the content of a data object.

showError(String) - Method in interface hdf.view.DataView.DataViewManager

Display error message

showError(String) - Method in class hdf.view.HDFView

Display error message

showError(Shell, String, String) - Static method in class hdf.view.Tools

Show an SWT error dialog with the given error message.

showImageValues() - Static method in class hdf.view.ViewProperties

Returns true if "show image values" is set.

showInformation(Shell, String, String) - Static method in class hdf.view.Tools

Show an SWT Information dialog with the given message.

showMetaData(HObject) - Method in class hdf.view.HDFView

showMetaData(HObject) - Method in class hdf.view.TreeView.DefaultTreeView

Displays the meta data of a data object.

showMetaData(HObject) - Method in interface hdf.view.TreeView.TreeView

Displays the meta data of a data object.

showObjRefData(long) - Method in class hdf.view.TableView.DefaultBaseTableView

showObjRefData(long) - Method in class hdf.view.TableView.DefaultCompoundDSTableView

showObjRefData(long) - Method in class hdf.view.TableView.DefaultScalarDSTableView

Display data pointed to by object references.

showRegRefData(String) - Method in class hdf.view.TableView.DefaultBaseTableView

showRegRefData(String) - Method in class hdf.view.TableView.DefaultCompoundDSTableView

showRegRefData(String) - Method in class hdf.view.TableView.DefaultScalarDSTableView

Display data pointed to by region references.

showRegRefValues() - Static method in class hdf.view.ViewProperties

Returns true if "show regref values" is set.

showStatus(String) - Method in interface hdf.view.DataView.DataViewManager

Display feedback message

showStatus(String) - Method in class hdf.view.HDFView

Display feedback message.

showWarning(Shell, String, String) - Static method in class hdf.view.Tools

Show an SWT Warning dialog with the given message.

SIGN_2 - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

SIGN_NONE - Static variable in class hdf.object.Datatype

See HDF5 User's Guide

sizeChoice - Variable in class hdf.view.dialog.NewDataObjectDialog

start - Variable in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider

startDims - Variable in class hdf.object.Dataset

The starting position of each dimension of a selected subset.

storage - Variable in class hdf.object.Dataset

The storage information.

storageLayout - Variable in class hdf.object.Dataset

The storage layout information.

strEnumMap - Variable in class hdf.view.dialog.NewDataObjectDialog

stride - Variable in class hdf.view.TableView.DefaultBaseTableView.RowHeaderDataProvider

stringToByte(String[], int) - Static method in class hdf.object.Dataset

Converts a string array into an array of bytes for a fixed string dataset.

T

TABLE - Enum constant in enum class hdf.view.TableView.DefaultBaseTableView.ViewType

TABLE - Enum constant in enum class hdf.view.ViewProperties.DataViewType

TableView - Interface in hdf.view.TableView

The table view interface for displaying data in table form

TableViewFactory - Class in hdf.view.TableView

TableViewFactory() - Constructor for class hdf.view.TableView.TableViewFactory

tclass - Variable in class hdf.view.dialog.NewDataObjectDialog

The attributes of the datatype

theValue - Variable in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

throwValidationFailedException(int, int, Object, String) - Method in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator

toBinaryString(long, int) - Static method in class hdf.view.Tools

Returns a string representation of the long argument as an unsigned integer in base 2.

toBinaryString(BigDecimal, int) - Static method in class hdf.view.Tools

toBinaryString(BigInteger, int) - Static method in class hdf.view.Tools

toBufferedImage(Image) - Static method in class hdf.view.Tools

This method returns a buffered image with the contents of an image.

toHexString(long, int) - Static method in class hdf.view.Tools

Returns a string representation of the long argument as an unsigned integer in base 16.

toHexString(BigDecimal, int) - Static method in class hdf.view.Tools

toHexString(BigInteger, int) - Static method in class hdf.view.Tools

Returns a string representation of the BigInteger argument as an unsigned integer in base 16.

toNative(long) - Static method in class hdf.object.h5.H5Datatype

Tools - Class in hdf.view

The "Tools" class contains various tools for HDF files such as jpeg to HDF converter.

Tools() - Constructor for class hdf.view.Tools

torder - Variable in class hdf.view.dialog.NewDataObjectDialog

toString() - Method in class hdf.object.Datatype

toString() - Method in class hdf.object.HObject

Returns the name of the object.

toString(String) - Method in class hdf.object.Attribute

Returns a string representation of the data value of the attribute.

toString(String, int) - Method in class hdf.object.Attribute

Returns a string representation of the data value of the attribute.

transform(double, double, double[]) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

transformBBox(Rectangle) - Method in class hdf.view.ImageView.DefaultImageView.Rotate90Filter

TRANSPOSED - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

TreeView - Interface in hdf.view.TreeView

TreeView defines APIs for opening a file and displaying the file structure in a tree structure.

TREEVIEW - Enum constant in enum class hdf.view.ViewProperties.DataViewType

TreeViewFactory - Class in hdf.view.TreeView

TreeViewFactory() - Constructor for class hdf.view.TreeView.TreeViewFactory

tsign - Variable in class hdf.view.dialog.NewDataObjectDialog

tsize - Variable in class hdf.view.dialog.NewDataObjectDialog

U

unsignedConverted - Variable in class hdf.object.Attribute

Flag to indicate is the original unsigned C data is converted.

unsignedConverted - Variable in class hdf.object.ScalarDS

Flag to indicate is the original unsigned C data is converted.

updateDataBuffer(Object) - Method in class hdf.view.TableView.DataProviderFactory.HDFDataProvider

updateDataConversionSettings() - Method in class hdf.view.TableView.DefaultBaseTableView

updateFont(Font) - Method in class hdf.view.TreeView.DefaultTreeView

updateItemIcon(HObject) - Method in class hdf.view.TreeView.DefaultTreeView

Updates the icon for the TreeItem representing the given HObject.

updateMetadata(Object) - Method in class hdf.object.Attribute

updateMetadata(Object) - Method in class hdf.object.Datatype

updateMetadata(Object) - Method in class hdf.object.fits.FitsDataset

updateMetadata(Object) - Method in class hdf.object.fits.FitsGroup

updateMetadata(Object) - Method in class hdf.object.h4.H4GRImage

updateMetadata(Object) - Method in class hdf.object.h4.H4Group

updateMetadata(Object) - Method in class hdf.object.h4.H4SDS

updateMetadata(Object) - Method in class hdf.object.h4.H4Vdata

updateMetadata(Object) - Method in class hdf.object.h5.H5CompoundDS

updateMetadata(Object) - Method in class hdf.object.h5.H5Group

updateMetadata(Object) - Method in class hdf.object.h5.H5Link

updateMetadata(Object) - Method in class hdf.object.h5.H5ScalarDS

updateMetadata(Object) - Method in interface hdf.object.MetaDataContainer

Updates an existing piece of metadata attached to this object.

updateMetadata(Object) - Method in class hdf.object.nc2.NC2Dataset

updateMetadata(Object) - Method in class hdf.object.nc2.NC2Group

updateReferenceDataset(H5File, H5File) - Static method in class hdf.object.h5.H5File

Updates values of scalar dataset object references in copied file.

updateValueInFile() - Method in class hdf.view.TableView.DefaultBaseTableView

Update dataset's value in file.

updateValueInFile() - Method in interface hdf.view.TableView.TableView

Write the change of a dataset into file.

useCommittedType - Variable in class hdf.view.dialog.NewDataObjectDialog

The Choice of the object list

UserOptionsDefaultPage - Class in hdf.view.dialog

UserOptionsDefaultPage extends PreferencePage to display the default button images for the ok, cancel, apply and defaults button.

UserOptionsDefaultPage() - Constructor for class hdf.view.dialog.UserOptionsDefaultPage

UserOptionsDefaultPage default constructor.

UserOptionsDefaultPage(String) - Constructor for class hdf.view.dialog.UserOptionsDefaultPage

Creates a new abstract UserOptionsDefaultPage with the given title.

UserOptionsDefaultPage(String, ImageDescriptor) - Constructor for class hdf.view.dialog.UserOptionsDefaultPage

Creates a new abstract UserOptionsDefaultPage with the given title and image.

UserOptionsDialog - Class in hdf.view.dialog

UserOptionsDialog displays components for choosing user options.

UserOptionsDialog(Shell, PreferenceManager, String) - Constructor for class hdf.view.dialog.UserOptionsDialog

UserOptionsGeneralPage - Class in hdf.view.dialog

UserOptionsGeneralPage.java - Configuration page for general application settings.

UserOptionsGeneralPage() - Constructor for class hdf.view.dialog.UserOptionsGeneralPage

UserOptionsHDFPage - Class in hdf.view.dialog

UserOptionsHDFPage.java - Configuration page for HDF-specific application settings.

UserOptionsHDFPage() - Constructor for class hdf.view.dialog.UserOptionsHDFPage

UserOptionsNode - Class in hdf.view.dialog

UserOptionsDialog displays components for choosing user options.

UserOptionsNode(String) - Constructor for class hdf.view.dialog.UserOptionsNode

Creates an UserOptionsNode with the given id.

UserOptionsNode(String, String, ImageDescriptor, String) - Constructor for class hdf.view.dialog.UserOptionsNode

Creates an UserOptionsNode with the given id, label, and image, and lazily-loaded preference page.

UserOptionsNode(String, IPreferencePage) - Constructor for class hdf.view.dialog.UserOptionsNode

Creates an UserOptionsNode with the given id and preference page.

UserOptionsViewModulesPage - Class in hdf.view.dialog

UserOptionsViewModulesPage.java - Configuration page for user-implementable modules.

UserOptionsViewModulesPage() - Constructor for class hdf.view.dialog.UserOptionsViewModulesPage

Utils - Class in hdf.object

V

validate(int, int, Object) - Method in class hdf.view.TableView.DataValidatorFactory.HDFDataValidator

valueOf(String) - Static method in enum class hdf.object.h5.H5CompoundDS.IO_TYPE

Returns the enum constant of this class with the specified name.

valueOf(String) - Static method in enum class hdf.object.h5.H5ScalarDS.IO_TYPE

Returns the enum constant of this class with the specified name.

valueOf(String) - Static method in enum class hdf.view.TableView.DefaultBaseTableView.ViewType

Returns the enum constant of this class with the specified name.

valueOf(String) - Static method in enum class hdf.view.ViewProperties.BITMASK_OP

Returns the enum constant of this class with the specified name.

valueOf(String) - Static method in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

Returns the enum constant of this class with the specified name.

valueOf(String) - Static method in enum class hdf.view.ViewProperties.DataViewType

Returns the enum constant of this class with the specified name.

values() - Static method in enum class hdf.object.h5.H5CompoundDS.IO_TYPE

Returns an array containing the constants of this enum class, in the order they are declared.

values() - Static method in enum class hdf.object.h5.H5ScalarDS.IO_TYPE

Returns an array containing the constants of this enum class, in the order they are declared.

values() - Static method in enum class hdf.view.TableView.DefaultBaseTableView.ViewType

Returns an array containing the constants of this enum class, in the order they are declared.

values() - Static method in enum class hdf.view.ViewProperties.BITMASK_OP

Returns an array containing the constants of this enum class, in the order they are declared.

values() - Static method in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

Returns an array containing the constants of this enum class, in the order they are declared.

values() - Static method in enum class hdf.view.ViewProperties.DataViewType

Returns an array containing the constants of this enum class, in the order they are declared.

VERSION - Static variable in class hdf.view.ViewProperties

the version of the HDFViewer

VIEW_NAME - Enum constant in enum class hdf.view.ViewProperties.DATA_VIEW_KEY

viewer - Variable in class hdf.view.TableView.DefaultBaseTableView

viewManager - Variable in class hdf.view.MetaDataView.DefaultBaseMetaDataView

ViewProperties - Class in hdf.view

ViewProperties(String, String) - Constructor for class hdf.view.ViewProperties

Creates a property list with given root directory of the HDFView.

ViewProperties.BITMASK_OP - Enum Class in hdf.view

Property keys control how the data is displayed.

ViewProperties.DATA_VIEW_KEY - Enum Class in hdf.view

Property keys control how the data is displayed.

ViewProperties.DataViewType - Enum Class in hdf.view

Used to create different DataViews for a given HObject.

viewType - Variable in class hdf.view.TableView.DefaultBaseTableView

W

workDir - Variable in class hdf.view.dialog.UserOptionsDialog

write() - Method in interface hdf.object.DataFormat

Writes the current memory buffer to the object in the file.

write() - Method in class hdf.object.Dataset

Writes the memory buffer of this dataset to file.

write(Object) - Method in class hdf.object.Attribute

write(Object) - Method in interface hdf.object.DataFormat

Writes a memory buffer to the object in the file.

write(Object) - Method in class hdf.object.fits.FitsDataset

write(Object) - Method in class hdf.object.h4.H4GRImage

write(Object) - Method in class hdf.object.h4.H4SDS

write(Object) - Method in class hdf.object.h4.H4Vdata

write(Object) - Method in class hdf.object.h5.H5CompoundDS

Writes the given data buffer into this dataset in a file.

write(Object) - Method in class hdf.object.h5.H5ScalarDS

Writes the given data buffer into this dataset in a file.

write(Object) - Method in class hdf.object.nc2.NC2Dataset

WRITE - Enum constant in enum class hdf.object.h5.H5CompoundDS.IO_TYPE

WRITE - Enum constant in enum class hdf.object.h5.H5ScalarDS.IO_TYPE

WRITE - Static variable in class hdf.object.FileFormat

File access flag for read/write permission.

writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.FileFormat

Attaches a given attribute to an object.

writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.fits.FitsFile

Creates a new attribute and attached to the object if attribute does not exist.

writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.h4.H4File

Creates a new attribute and attaches it to the object if the attribute does not exist.

writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.h5.H5File

writeAttribute(HObject, Attribute, boolean) - Method in class hdf.object.nc2.NC2File

writeDataToFile(FileFormat) - Method in class hdf.view.HDFView

Write the change of data to the given file.

writeMetadata(Object) - Method in class hdf.object.Attribute

writeMetadata(Object) - Method in class hdf.object.Datatype

writeMetadata(Object) - Method in class hdf.object.fits.FitsDataset

writeMetadata(Object) - Method in class hdf.object.fits.FitsGroup

Creates a new attribute and attached to this dataset if attribute does not exist.

writeMetadata(Object) - Method in class hdf.object.h4.H4GRImage

writeMetadata(Object) - Method in class hdf.object.h4.H4Group

writeMetadata(Object) - Method in class hdf.object.h4.H4SDS

writeMetadata(Object) - Method in class hdf.object.h4.H4Vdata

writeMetadata(Object) - Method in class hdf.object.h5.H5CompoundDS

writeMetadata(Object) - Method in class hdf.object.h5.H5Datatype

writeMetadata(Object) - Method in class hdf.object.h5.H5Group

writeMetadata(Object) - Method in class hdf.object.h5.H5Link

writeMetadata(Object) - Method in class hdf.object.h5.H5ScalarDS

writeMetadata(Object) - Method in interface hdf.object.MetaDataContainer

Writes a specific piece of metadata (such as an attribute) into the file.

writeMetadata(Object) - Method in class hdf.object.nc2.NC2Dataset

writeMetadata(Object) - Method in class hdf.object.nc2.NC2Group

Creates a new attribute and attached to this dataset if attribute does not exist.

Z

zeroArrayCheck(byte[]) - Static method in class hdf.object.h5.H5Datatype

Checks if a reference datatype is all zero.

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